DRSC/TRiP Functional Genomics Resources

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Protein Alignment mAChR-B and chrm3b

DIOPT Version :9

Sequence 1:NP_649764.1 Gene:mAChR-B / 40955 FlyBaseID:FBgn0037546 Length:1019 Species:Drosophila melanogaster
Sequence 2:XP_001919160.1 Gene:chrm3b / 100149598 ZFINID:ZDB-GENE-090410-5 Length:494 Species:Danio rerio


Alignment Length:893 Identity:158/893 - (17%)
Similarity:249/893 - (27%) Gaps:478/893 - (53%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 ILGPVLPPFALWQTILIAICLAICIILTVGGNILVLLAFIVDRNIRQPSNYFIASLAATDMLIGT 184
            :|...|...::.|.::||:......:||:.||.||||:|.:::.::..:||::.|||..|::||.
Zfish    49 VLSDPLGGHSVLQVVMIALLCGSISLLTIIGNTLVLLSFKLNKQLKTVNNYYLLSLAFADLIIGV 113

  Fly   185 VSMPFYTIYVLKGYWDLGPMLCDLWLSVDYTVCLVSQYTVLLITIDRYCSVKIAAKYRSWRTRTR 249
            :||..||.|::...|.||...|||||::||.....|...:|:|:.|||.||.....||:.||..|
Zfish   114 LSMNLYTTYIIMDQWALGNFACDLWLAIDYVASNASVMNLLVISFDRYFSVTRPLTYRAKRTTKR 178

  Fly   250 VIYMVTITWIIPALLFFISIFGWEHFTGKRDLLPGQCAVQFLKDPIFNTALIIGYYWTTLIVLFV 314
            .:.|:.:.|.|..:|:..:|..|::|.|:|.:.|.:|.:||:.:||......|..::..:.::.|
Zfish   179 AMTMIGLAWSISFILWAPAILFWQYFVGERTVEPDKCYIQFISEPITTFCTAIAAFYLPVTIMTV 243

  Fly   315 LYAGIYKTAYDMQKRSEAKQRKMQSMVALSAGAMSGMAGHAAGIGVIEEKILKTKVELAGDQTDL 379
            ||..|||   :.:.||.                                       ||||     
Zfish   244 LYWRIYK---ETENRSR---------------------------------------ELAG----- 261

  Fly   380 DSACTTVIKRLSGSGQANPLAVATEEVEKMTPEQRRASAAKIQEEAKKREAAVDAEKSERSSSPA 444
                      |..||..                                                
Zfish   262 ----------LKASGNV------------------------------------------------ 268

  Fly   445 FDSDEESSVNQAQQLITQQKLNNMRKRSSIGLVFGAQAALLATRGKGNLQKSTTNSKSIEAMHQY 509
                ||.||....|                                      |.:|:|       
Zfish   269 ----EEESVVVVPQ--------------------------------------TGSSRS------- 284

  Fly   510 HHHQQHHHNQSPLQRAQSKEEMRSLHHHQNQQQPHHQHHQNQPNPPLDRPKRTSCSTLSQIAEHD 574
                                               |..::.||..|:.:.|..            
Zfish   285 -----------------------------------HSSYELQPAAPMRKTKTR------------ 302

  Fly   575 RLVDLSAPPTLLNTSDPLSPVDLAPIEVPSDQVHQGLVQTILPPPDAFQCPTPLSDDYSDRPFGN 639
            ||...|......::||                                                 
Zfish   303 RLWFWSRGDVERSSSD------------------------------------------------- 318

  Fly   640 SSGNSELALTYDLMTNSELRYMDESSAMLASVTANSTTSPNDSVQGKPPVLPPPPPARRNPPKSN 704
            |..|:|.|::.|                                                     
Zfish   319 SWNNNETAISID----------------------------------------------------- 330

  Fly   705 LNQSLSQTPSQNQSPSQSLSLNLNPNHNQSQSQSIEEAVAIEKRLLVSYTGIEDFAKVRRESCIE 769
                            ||         :..:.:..|....|||:                     
Zfish   331 ----------------QS---------DDDEEEDAEHIYTIEKQ--------------------- 349

  Fly   770 AICLLDVPGKLAADCPHRRASSPMETSSKDAILYSPMPPMPLSPKVKTSTPQTGTPQSAAGVTPP 834
                 |:..|                                                       
Zfish   350 -----DLEAK------------------------------------------------------- 354

  Fly   835 VPLERIEERETSDSNTNKMPSTSGTTSSTGGVGGGGEQDGVGATKKNAGDDDANREEKSLAASRN 899
                               ||..|.:.|:                      ..:.:::.:.::|.
Zfish   355 -------------------PSKFGVSKSS----------------------TLDSKDQPVKSARK 378

  Fly   900 SSKRAFIHSIGKHFKSKKALPLILGVGGRQKSKSENRARKAFRTISFILGCFVACWTPYHVLALV 964
            ::||             |.|.|:             :.:||.:|:|.||..|:..||||:::.|:
Zfish   379 TNKR-------------KKLSLV-------------KEKKAAQTLSAILLAFIITWTPYNIMVLL 417

  Fly   965 EGFCRHPPCINEHLYMFSYFLCYANSPMNPFCYALANQQFKKTFTRIL 1012
            ..||  ..||.|.|:...|:|||.||.:||.||||.|:.|:.||..||
Zfish   418 NAFC--DGCIPETLWALGYWLCYVNSTVNPMCYALCNKAFRTTFRSIL 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-BNP_649764.1 7tm_1 150..>341 CDD:278431 67/190 (35%)
7tm_4 150..>336 CDD:304433 67/185 (36%)
chrm3bXP_001919160.1 7tm_4 72..>244 CDD:304433 61/171 (36%)
7tm_1 79..448 CDD:278431 141/846 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1245472at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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