DRSC/TRiP Functional Genomics Resources

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Protein Alignment mAChR-B and chrm4

DIOPT Version :9

Sequence 1:NP_649764.1 Gene:mAChR-B / 40955 FlyBaseID:FBgn0037546 Length:1019 Species:Drosophila melanogaster
Sequence 2:XP_031755648.1 Gene:chrm4 / 100127705 XenbaseID:XB-GENE-5872073 Length:505 Species:Xenopus tropicalis


Alignment Length:930 Identity:181/930 - (19%)
Similarity:273/930 - (29%) Gaps:461/930 - (49%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 WYRNFDVNNTNLLLAVRNQSSDGGSTMSGSSSDSEILGPVLPPFALWQTILIAICLAICIILTVG 149
            |.:..: |.||    ..||:.|..:...|:....|:             |.||.......::||.
 Frog    24 WLQEME-NMTN----ATNQTLDKTTMAPGTYQTMEM-------------IFIATVTGSLSLVTVV 70

  Fly   150 GNILVLLAFIVDRNIRQPSNYFIASLAATDMLIGTVSMPFYTIYVLKGYWDLGPMLCDLWLSVDY 214
            |||||:|:..|:|.::..:|||:.|||..|::||..||..|::|::||||.|||::|||||::||
 Frog    71 GNILVMLSIKVNRQLQTVNNYFLFSLACADLIIGVFSMNLYSLYIIKGYWPLGPIVCDLWLALDY 135

  Fly   215 TVCLVSQYTVLLITIDRYCSVKIAAKYRSWRTRTRVIYMVTITWIIPALLFFISIFGWEHFTGKR 279
            .|...|...:|:|:.|||..|.....|.:.||......|:...|::..:|:..:|..|:...|:|
 Frog   136 VVSNASVMNLLIISFDRYFCVTKPLTYPARRTTKMAGLMIAAAWLLSFVLWAPAILFWQFIVGER 200

  Fly   280 DLLPGQCAVQFLKDPIFNTALIIGYYWTTLIVLFVLYAGIYKTAYDMQKR--SEAKQRKMQSMVA 342
            .:..|:|.:|||.:|:......|..::..::::.:||..|...:....:|  :|.:|.|.:.:  
 Frog   201 TVASGECYIQFLSNPVVTFGTAIAAFYLPVVIMTILYIHISLASRSRVRRHCTETRQEKKKPI-- 263

  Fly   343 LSAGAMSGMAGHAAGIGVIEEKILKTKVELAGDQTDLDSACTTVIKRLSGSGQANPLAVATEEVE 407
                                                              |...:||...|:.:.
 Frog   264 --------------------------------------------------SSMKSPLIKQTKNLP 278

  Fly   408 KMTPEQRRASAAKIQEEAKKREAAVDAEKSERSSSPAFDSDEESSVNQAQQLITQQKLNNMRKRS 472
            |..|          .:||.|:|                                    |.:|   
 Frog   279 KQDP----------GDEAVKKE------------------------------------NGVR--- 294

  Fly   473 SIGLVFGAQAALLATRGKGNLQKSTTNSKSIEAMHQYHHHQQHHHNQSPLQRAQSKEEMRSLHHH 537
                             .|.::||.||                      ||.|:.||.       
 Frog   295 -----------------NGKIEKSMTN----------------------LQTAEEKET------- 313

  Fly   538 QNQQQPHHQHHQNQPNPPLDRPKRTSCSTLSQIAEHDRLVDLSAPPTLLNTSDPLSPVDLAPIEV 602
            .|:.......|    |||..:|                            .||..|.|.|||   
 Frog   314 SNESSSASLSH----NPPEKQP----------------------------VSDASSGVVLAP--- 343

  Fly   603 PSDQVHQGLVQTILPPPDAFQCPTPLSDDYSDRPFGNSSGNSELALTYDLMTNSELRYMDESSAM 667
                                                                             
 Frog   344 ----------------------------------------------------------------- 343

  Fly   668 LASVTANSTTSPNDSVQGKPPVLPPPPPARRNPPKSNLNQSLSQTPSQNQSPSQSLSLNLNPNHN 732
                           .|..||:          |.|.|:....|:.                    
 Frog   344 ---------------TQNMPPL----------PSKVNVASKWSKI-------------------- 363

  Fly   733 QSQSQSIEEAVAIEKRLLVSYTGIEDFAKVRRESCIEAICLLDVPGKLAADCPHRRASSPMETSS 797
                           :::...||.|         |:.||       ::..:|             
 Frog   364 ---------------KIVTKQTGNE---------CVTAI-------EIVPEC------------- 384

  Fly   798 KDAILYSPMPPMPLSPKVKTSTPQTGTPQSAAGVTPPVPLERIEERETSDSNTNKMPSTSGTTSS 862
                      .:||             ||.|                      |..|        
 Frog   385 ----------AIPL-------------PQQA----------------------NNRP-------- 396

  Fly   863 TGGVGGGGEQDGVGATKKNAGDDDANREEKSLAASRNSSKRAFIHSIGKHFKSKKALPLILGVGG 927
                                    .|...|..:.:||..                          
 Frog   397 ------------------------GNVARKFASIARNQV-------------------------- 411

  Fly   928 RQKSKSENRARKAFRTISFILGCFVACWTPYHVLALVEGFCRHPPCINEHLYMFSYFLCYANSPM 992
            |:|.:...|.:|..|||..||..|:..||||:|:.|:..||:  .||.|.::...|:|||.||.:
 Frog   412 RKKRQMAAREKKVTRTIFAILLAFIITWTPYNVMVLINTFCQ--TCIPETVWYIGYWLCYVNSTI 474

  Fly   993 NPFCYALANQQFKKTFTRIL 1012
            ||.||||.|..|||||..:|
 Frog   475 NPACYALCNATFKKTFKHLL 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-BNP_649764.1 7tm_1 150..>341 CDD:278431 67/192 (35%)
7tm_4 150..>336 CDD:304433 66/187 (35%)
chrm4XP_031755648.1 7tmA_mAChR_M4 55..490 CDD:341344 169/875 (19%)
TM helix 1 57..81 CDD:341344 10/23 (43%)
TM helix 2 90..112 CDD:341344 11/21 (52%)
TM helix 3 128..150 CDD:341344 10/21 (48%)
TM helix 4 173..189 CDD:341344 3/15 (20%)
TM helix 5 215..238 CDD:341344 3/22 (14%)
TM helix 6 425..447 CDD:341344 11/21 (52%)
TM helix 7 458..483 CDD:341344 13/24 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1245472at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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