DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pbp95 and CEF1

DIOPT Version :9

Sequence 1:NP_649760.1 Gene:Pbp95 / 40949 FlyBaseID:FBgn0037540 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_013940.1 Gene:CEF1 / 855253 SGDID:S000004826 Length:590 Species:Saccharomyces cerevisiae


Alignment Length:475 Identity:78/475 - (16%)
Similarity:157/475 - (33%) Gaps:143/475 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   342 FTTKEDMMLFAAVEEYNGKFHCFPRSLFPNRSLTQLRTRYHNVLAQRNKTDSWSVQDDTRLMSFV 406
            :|..||.:|.|||::|.........||...::..|...|::..|..:.....:|.::|.:|:...
Yeast    13 WTNVEDQILKAAVQKYGTHQWSKVASLLQKKTARQSELRWNEYLNPKLNFTEFSKEEDAQLLDLA 77

  Fly   407 TQYGASQWLNCATFLGNHTRTSCRTRFLVIKKFLEQ--------------------NPNAKVEDL 451
            .:. .:||...|..:....:. |..|:   .:.||.                    ||||:.:  
Yeast    78 REL-PNQWRTIADMMARPAQV-CVERY---NRLLESEDSGGAALSTGVTDLKAGDINPNAETQ-- 135

  Fly   452 PRRRSKKVSLVNSDNWAQRLQEWQEDPESLVNDNPPKGTRVRGPKSKKARIERQAESFSRLSKVD 516
                     :...||     .:.:::.:.::.:...:....:|.|:.:...||..|...|::::.
Yeast   136 ---------MARPDN-----GDLEDEEKEMLAEARARLLNTQGKKATRKIRERMLEESKRIAELQ 186

  Fly   517 IEFCNFFKFSYNLTLSTPKTFPVPKDV-YNLAYVIRALAYKPPIRPSLLQNIFMPNDVLKCYNSM 580
             :.....:...|:.:..||. ....|: ||     ..:.|:....|.:.........:.|.:...
Yeast   187 -KRRELKQAGINVAIKKPKK-KYGTDIDYN-----EDIVYEQAPMPGIYDTSTEDRQIKKKFEQF 244

  Fly   581 IR--NLPDEEGDMKSPLLPPNWSTMMGFRALCILSGDCRKDTETRSFEYNESLPPIQL------- 636
            .|  |....:|:...|                   ....|| :.|..:.||.:....|       
Yeast   245 ERKVNRKGLDGNKDKP-------------------SKKNKD-KKRKHDENEHVEKAALGESTTLT 289

  Fly   637 ---------------------FRKRLQALFYRT-------TLLS--------------------- 652
                                 ::|:|::...:.       |:|:                     
Yeast   290 DEYKKPKLILSAPGTKQGKVTYKKKLESKRQKLIEAQATGTVLTPKELLPHDSGQEDNERSNIKS 354

  Fly   653 --RLESQLFTDLPSALVSLPRPKHDY------------AKMGTHVELIDPEPA-PQNDLKSEPLS 702
              :|:|::...|.....|||.||:|:            |::..:.:..:.|.| .:.|...||.|
Yeast   355 GKQLKSRIRKFLVQMFASLPSPKNDFEIVLSEDEKEEDAEIAEYEKEFENERAMNEEDNFIEPPS 419

  Fly   703 ENEVINTVKQELEMEY-TVP 721
            :|:........:.:.| |:|
Yeast   420 QNDAPRVSLVAVPLAYSTLP 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pbp95NP_649760.1 DUF883 4..>74 CDD:295076
SANT <194..240 CDD:304392
SANT 229..276 CDD:197842
Myb_DNA-binding 229..275 CDD:278669
Myb_DNA-bind_6 287..350 CDD:290632 3/7 (43%)
SANT 392..438 CDD:197842 8/45 (18%)
Myb_DNA-binding 393..437 CDD:278669 8/43 (19%)
CEF1NP_013940.1 REB1 1..491 CDD:227476 78/475 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5147
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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