DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pbp95 and MYB50

DIOPT Version :10

Sequence 1:NP_649760.1 Gene:Pbp95 / 40949 FlyBaseID:FBgn0037540 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_176068.1 Gene:MYB50 / 842131 AraportID:AT1G57560 Length:314 Species:Arabidopsis thaliana


Alignment Length:167 Identity:40/167 - (23%)
Similarity:61/167 - (36%) Gaps:47/167 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   214 SCEAMWRVYLTPDLRRDDWSPEEDETL--LAVATANRMQNWELIAASLDRRSDYQCFVRFHTALR 276
            ||...|..||.|||:|..:|.||...:  |.....||   |..|||.|..|:|.:....:::.::
plant    52 SCRLRWINYLRPDLKRGAFSSEEQNLIVELHAVLGNR---WSQIAARLPGRTDNEIKNLWNSCIK 113

  Fly   277 FLLEPK-----------------------NSHRWSEEDNDKL----------RAIVDRNTANSVI 308
            ..|..|                       ||..:|.|.|..|          .:...:..:||| 
plant   114 KKLMKKGIDPITHKPLSEVGKETNRSDNNNSTSFSSETNQDLFVKKTSDFAEYSAFQKEESNSV- 177

  Fly   309 NWKKVVEYFPDKSKSTLIGRYYYVLHPSISHEPFTTK 345
                    ....|.|::|...:.:...|:|:..|.|:
plant   178 --------SLRNSLSSMIPTQFNIDDGSVSNAGFDTQ 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pbp95NP_649760.1 SANT <194..240 CDD:473887 12/25 (48%)
SANT 229..276 CDD:197842 14/48 (29%)
Myb_DNA-bind_6 287..350 CDD:372817 14/69 (20%)
SANT 392..438 CDD:197842
MYB50NP_176068.1 PLN03091 1..310 CDD:215570 40/167 (24%)
Blue background indicates that the domain is not in the aligned region.

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