DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pbp95 and MYB116

DIOPT Version :10

Sequence 1:NP_649760.1 Gene:Pbp95 / 40949 FlyBaseID:FBgn0037540 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001321760.1 Gene:MYB116 / 839118 AraportID:AT1G25340 Length:308 Species:Arabidopsis thaliana


Alignment Length:237 Identity:47/237 - (19%)
Similarity:87/237 - (36%) Gaps:68/237 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   394 WSVQDDTRLMSFVTQYGASQWLNCATFLGNHTRTSCRTRFLVIKKFLEQNPNAKVEDLPRRRSKK 458
            |::::||.|.::::..|..:|    ..|...:..|||.|:|...|     |:.|..:|..:....
plant    23 WTLEEDTLLTNYISHNGEGRW----NLLAKSSGKSCRLRWLNYLK-----PDIKRGNLTPQEQLL 78

  Fly   459 VSLVNSDNWAQRLQEWQEDPESLV--NDNPPKGTRVRGPKSKKARIERQAESFSRLSKVDIEFCN 521
            :..::| .|..|   |.:..:.|.  .||..|       ...:.|:::||...:           
plant    79 ILELHS-KWGNR---WSKISKYLPGRTDNDIK-------NYWRTRVQKQARQLN----------- 121

  Fly   522 FFKFSYNLTLSTPKTFPVPKDVYNLAYVIRALAYKPPIRPSLLQNIFMPNDVLKCYNSMIRNLPD 586
                             :..:.:....|:|:..:     |.|:..|   .|     ||...|:..
plant   122 -----------------IDSNSHKFIEVVRSFWF-----PRLINEI---KD-----NSYTNNIKA 156

  Fly   587 EEGDMKSPLLPPNWSTMMGFRAL-C--ILSGDCRKDTETRSF 625
            ...|:..|:|..  |..:||..: |  .:|.|.:|.::...|
plant   157 NAPDLLGPILRD--SKDLGFNNMDCSTSMSEDLKKTSQFMDF 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pbp95NP_649760.1 SANT <194..240 CDD:473887
SANT 229..276 CDD:197842
Myb_DNA-bind_6 287..350 CDD:372817
SANT 392..438 CDD:197842 12/43 (28%)
MYB116NP_001321760.1 PLN03091 19..>128 CDD:215570 27/152 (18%)
Blue background indicates that the domain is not in the aligned region.

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