DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pbp95 and MYB53

DIOPT Version :10

Sequence 1:NP_649760.1 Gene:Pbp95 / 40949 FlyBaseID:FBgn0037540 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_201326.1 Gene:MYB53 / 836648 AraportID:AT5G65230 Length:310 Species:Arabidopsis thaliana


Alignment Length:223 Identity:50/223 - (22%)
Similarity:87/223 - (39%) Gaps:70/223 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   214 SCEAMWRVYLTPDLRRDDWSPEEDETLLAV--ATANRMQNWELIAASLDRRSDYQCFVRFHTALR 276
            ||...|..||.||::|..:|.||:||:|.:  ...|:   |.:||:.|..|:|.:....::|.|:
plant    52 SCRLRWTNYLRPDIKRGKFSAEEEETILNLHAVLGNK---WSMIASHLPGRTDNEIKNFWNTHLK 113

  Fly   277 FLL----------EPKNSHRWSEEDN----DKLRAIVDRNTANSVINWKKVVEYFPDKSKSTL-- 325
            ..|          :|:....:|....    ..||.:||            :.:.||.:.::.|  
plant   114 KKLIQMGFDPMTHQPRTDDIFSSLSQLMSLSNLRGLVD------------LQQQFPMEDQALLNL 166

  Fly   326 ------IGRYYYVLHPS-----------------ISHEPFTTKEDM-MLFAAVEEYNGKFHCFPR 366
                  :..:.|:|.||                 |.....|:..|: .|.:.::::|        
plant   167 QTEMAKLQLFQYLLQPSPAPMSINNINPNILNLLIKENSVTSNIDLGFLSSHLQDFN-------- 223

  Fly   367 SLFPNRSLTQLRTRYHNVLAQRNKTDSW 394
                |.:|..|:|...|..:| |.:..|
plant   224 ----NNNLPSLKTLDDNHFSQ-NTSPIW 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pbp95NP_649760.1 SANT <194..240 CDD:473887 12/25 (48%)
SANT 229..276 CDD:197842 15/48 (31%)
Myb_DNA-bind_6 287..350 CDD:372817 15/92 (16%)
SANT 392..438 CDD:197842 1/3 (33%)
MYB53NP_201326.1 PLN03091 1..>128 CDD:215570 24/78 (31%)

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