DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pbp95 and MYB78

DIOPT Version :10

Sequence 1:NP_649760.1 Gene:Pbp95 / 40949 FlyBaseID:FBgn0037540 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001190502.1 Gene:MYB78 / 835024 AraportID:AT5G49620 Length:321 Species:Arabidopsis thaliana


Alignment Length:313 Identity:65/313 - (20%)
Similarity:119/313 - (38%) Gaps:79/313 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   366 RSLFPNRSLTQLRTRYHNVLAQRNKTDSWSVQDDTRLMSFVTQYGASQW---LNCATFLGNHTRT 427
            |||..|:::.:. |:....:..|.  ..|:|::|..|::::..:|..:|   ..||..  ..|..
plant     6 RSLKINKNMEEF-TKVEEEMDVRR--GPWTVEEDLELINYIASHGEGRWNSLARCAEL--KRTGK 65

  Fly   428 SCRTRFLVIKK--------FLEQ------------NPN-------AKVED--------LPRRRSK 457
            |||.|:|...:        .||:            |.|       :..||        ||.|...
plant    66 SCRLRWLNYLRPDVRRGNITLEEQLLILELHTRWGNSNEFDHKFSSSCEDRWSKIAQYLPGRTDN 130

  Fly   458 KVSLVNSDNWAQRLQEWQEDPESLVNDNPPKGTR--VRGPKSKKARIER-QAESFSRLSKVDIEF 519
            ::    .:.|..|:|:..:..:..||....|.|.  :..|:    .:|| ||.|   :..|.:..
plant   131 EI----KNYWRTRVQKHAKQLKCDVNSQQFKDTMKYLWMPR----LVERIQAAS---IGSVSMSS 184

  Fly   520 C-----NFFKFSYNLTLSTPKTFPVPKDVYNLAYVIRALAYKPPIRPSLLQNIFMPNDVLKC-YN 578
            |     :.|..:.|.|          .:|.|||.:.....|..|...|:.  :...:|:.:| .:
plant   185 CVTTSSDQFVINNNNT----------NNVDNLALMSNPNGYITPDNSSVA--VSPVSDLTECQVS 237

  Fly   579 SMIRNLPDEEGDMKSPLLPPNWSTMMGFRALCILSGDCRKDTETRSFEYNESL 631
            |.:..:..:|..:...:..||:..    .:..:|:||..|..:.....:.|::
plant   238 SEVWKIGQDENLVDPKMTSPNYMD----NSSGLLNGDFTKMQDQSDLNWFENI 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pbp95NP_649760.1 SANT <194..240 CDD:473887
SANT 229..276 CDD:197842
Myb_DNA-bind_6 287..350 CDD:372817
SANT 392..438 CDD:197842 14/48 (29%)
MYB78NP_001190502.1 PLN03212 23..>157 CDD:178751 29/141 (21%)
Blue background indicates that the domain is not in the aligned region.

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