DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pbp95 and MYB23

DIOPT Version :10

Sequence 1:NP_649760.1 Gene:Pbp95 / 40949 FlyBaseID:FBgn0037540 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_198849.1 Gene:MYB23 / 834031 AraportID:AT5G40330 Length:219 Species:Arabidopsis thaliana


Alignment Length:244 Identity:45/244 - (18%)
Similarity:76/244 - (31%) Gaps:95/244 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   198 WNQISTLDLEYRHSPYSCEAMWRVYLTPDLRRDDWSPEEDETLLAV--ATANRMQNWELIAASLD 260
            ||:|:. ....:....||...|..||:|::.|.:::.:|::.::.:  ...||   |.|||..:.
plant    37 WNRIAK-KTGLKRCGKSCRLRWMNYLSPNVNRGNFTDQEEDLIIRLHKLLGNR---WSLIAKRVP 97

  Fly   261 RRSDYQ-------------------------CFVRFHTALRFLLEPKNSHRWSEEDNDKLRAIVD 300
            .|:|.|                         |.|....::..:....:||:  |....|      
plant    98 GRTDNQVKNYWNTHLSKKL
GLGDHSTAVKAACGVESPPSMALITTTSSSHQ--EISGGK------ 154

  Fly   301 RNTANSVINWKKVVEYFPDKSKSTLIGRYYYVLHPSISHEPFTTKEDMMLFAAVEEYNGKFHCFP 365
                ||.:.:..:|:....|.||.|:               ..|..|:.:.|.|......|    
plant   155 ----NSTLRFDTLVDESKLKPKSKLV---------------HATPTDVEVAATVPNLFDTF---- 196

  Fly   366 RSLFPNRSLTQLRTRYHNVLAQRNKTDSWSVQDDTRL-----MSFVTQY 409
                                        |.::||..|     |.|...|
plant   197 ----------------------------WVLEDDFELSSLTMMDFTNGY 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pbp95NP_649760.1 SANT <194..240 CDD:473887 11/41 (27%)
SANT 229..276 CDD:197842 13/73 (18%)
Myb_DNA-bind_6 287..350 CDD:372817 11/62 (18%)
SANT 392..438 CDD:197842 7/23 (30%)
MYB23NP_198849.1 PLN03212 13..>116 CDD:178751 20/82 (24%)

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