DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pbp95 and TT2

DIOPT Version :10

Sequence 1:NP_649760.1 Gene:Pbp95 / 40949 FlyBaseID:FBgn0037540 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001331958.1 Gene:TT2 / 833520 AraportID:AT5G35550 Length:261 Species:Arabidopsis thaliana


Alignment Length:166 Identity:46/166 - (27%)
Similarity:66/166 - (39%) Gaps:32/166 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   214 SCEAMWRVYLTPDLRRDDWSPEEDETLLAVATANRMQN-WELIAASLDRRSDYQCFVRFHTALRF 277
            ||...|:.||.|.::|.:.|.:|:|  |.:...|.:.| |.|||..|..|:|.:....:::.||.
plant    57 SCRLRWKNYLRPGIKRGNISSDEEE--LIIRLHNLLGNRWSLIAGRLPGRTDNEIKNHWNSNLRK 119

  Fly   278 LL---EPKNSHRWSEEDNDKLRAIVDRNTANSVINWKKVVEYFPDKSKSTLIGRYYYVLHPSISH 339
            .|   :.|...|.....|::....|.|..|   |...|.: .|.|.|           |....|.
plant   120 RLPKTQTKQPKRIKHSTNNENNVCVIRTKA---IRCSKTL-LFSDLS-----------LQKKSST 169

  Fly   340 EPFTTKEDMM------LFAAVE----EYNGKFHCFP 365
            .|...||..|      |...:|    ..:.:|| ||
plant   170 SPLPLKEQEMDQGGSSLMGDLEFDFDRIHSEFH-FP 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pbp95NP_649760.1 SANT <194..240 CDD:473887 10/25 (40%)
SANT 229..276 CDD:197842 14/47 (30%)
Myb_DNA-bind_6 287..350 CDD:372817 15/68 (22%)
SANT 392..438 CDD:197842
TT2NP_001331958.1 PLN03212 <50..>129 CDD:178751 24/73 (33%)
Blue background indicates that the domain is not in the aligned region.

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