DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pbp95 and MYB29

DIOPT Version :10

Sequence 1:NP_649760.1 Gene:Pbp95 / 40949 FlyBaseID:FBgn0037540 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_196386.1 Gene:MYB29 / 830662 AraportID:AT5G07690 Length:336 Species:Arabidopsis thaliana


Alignment Length:171 Identity:46/171 - (26%)
Similarity:76/171 - (44%) Gaps:30/171 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   214 SCEAMWRVYLTPDLRRDDWSPEEDETLLAVATANRMQNWELIAASLDRRSDYQCFVRFHTALRFL 278
            ||...|..||.||::|.::|.|| |.::.:..|:|...|.:||..|.:|:|.:....::|.|:.|
plant    52 SCRLRWANYLKPDIKRGEFSYEE-EQIIIMLHASRGNKWSVIARHLPKRTDNEIKNYWNTHLKKL 115

  Fly   279 LEPKN----SHRWSEEDNDKLRAIVDRNTANSVINWKKVVEYFPDKSKSTLIGRYYYVLHPSISH 339
            |..|.    :|:....|::.     |..:.:..|:.|.:.   |..||:.          |.|:.
plant   116 LIDKGIDPVTHKPLAYDSNP-----DEQSQSGSISPKSLP---PSSSKNV----------PEITS 162

  Fly   340 EPFTTKEDMMLFAAVEEYNGKFHCFPRSLFPNRSLTQLRTR 380
            ...|.|.|..|       :.|..||.||...::.|.::..|
plant   163 SDETPKYDASL-------SSKKRCFKRSSSTSKLLNKVAAR 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pbp95NP_649760.1 SANT <194..240 CDD:473887 12/25 (48%)
SANT 229..276 CDD:197842 14/46 (30%)
Myb_DNA-bind_6 287..350 CDD:372817 12/62 (19%)
SANT 392..438 CDD:197842
MYB29NP_196386.1 PLN03091 1..>140 CDD:215570 28/93 (30%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.