DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pbp95 and MYB4

DIOPT Version :10

Sequence 1:NP_649760.1 Gene:Pbp95 / 40949 FlyBaseID:FBgn0037540 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_195574.1 Gene:MYB4 / 830018 AraportID:AT4G38620 Length:282 Species:Arabidopsis thaliana


Alignment Length:233 Identity:64/233 - (27%)
Similarity:91/233 - (39%) Gaps:62/233 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   214 SCEAMWRVYLTPDLRRDDWSPEEDETLLAVAT--ANRMQNWELIAASLDRRSDYQCFVRFHTALR 276
            ||...|..||.|||:|.:::.||||.::.:.:  .|:   |.|||..|..|:|.:....::|.:|
plant    52 SCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNK---WSLIAGRLPGRTDNEIKNYWNTHIR 113

  Fly   277 FLL-----EPKNSHRWSEEDN-------DKLRAIVDRNTANSVINWKKVVEYFPDKSKSTLIGRY 329
            ..|     :| .|||..:|.:       .:|..:.. ||.|........||.|            
plant   114 RKLINRGIDP-TSHRPIQESSASQDSKPTQLEPVTS-NTINISFTSAPKVETF------------ 164

  Fly   330 YYVLHPSISHEPFTTKEDMMLFAAVEEYNGKFHCFPRSLFPNRSLTQLRTRYHNVLAQRNKTDSW 394
                |.|||....:.|..|:.|.  ||   |..|..:..||:.:| :||.               
plant   165 ----HESISFPGKSEKISMLTFK--EE---KDECPVQEKFPDLNL-ELRI--------------- 204

  Fly   395 SVQDDT-RLMSFVTQYGASQWLNC-ATFLGNHTRTSCR 430
            |:.||. ||..    :|.|....| ...||......||
plant   205 SLPDDVDRLQG----HGKSTTPRCFKCSLGMINGMECR 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pbp95NP_649760.1 SANT <194..240 CDD:473887 13/25 (52%)
SANT 229..276 CDD:197842 14/48 (29%)
Myb_DNA-bind_6 287..350 CDD:372817 14/69 (20%)
SANT 392..438 CDD:197842 12/41 (29%)
MYB4NP_195574.1 PLN03091 1..>140 CDD:215570 29/91 (32%)

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