DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pbp95 and MYB39

DIOPT Version :10

Sequence 1:NP_649760.1 Gene:Pbp95 / 40949 FlyBaseID:FBgn0037540 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_567540.2 Gene:MYB39 / 827500 AraportID:AT4G17785 Length:360 Species:Arabidopsis thaliana


Alignment Length:373 Identity:83/373 - (22%)
Similarity:129/373 - (34%) Gaps:112/373 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   214 SCEAMWRVYLTPDLRRDDWSPEEDETL--LAVATANRMQNWELIAASLDRRSDYQCFVRFHTALR 276
            ||...|..||.||:||..:|..|:.|:  |.....|:   |..||..|..|:|.:....::|.:|
plant    53 SCRLRWMNYLRPDIRRGKFSDGEESTIVRLHALLGNK---WSKIAGHLPGRTDNEIKNYWNTHMR 114

  Fly   277 FLL----------EPKNSHRWSEEDNDKLRAIVDRNTA---NSVINWKKVVEYFPDKSKSTLIGR 328
            ..|          ||:.:......|..::.|....|..   |:::|....:|   |..|..||.:
plant   115 KKLLQMGIDPVTHEPRTNDLSPILDVSQMLAAAINNGQFGNNNLLNNNTALE---DILKLQLIHK 176

  Fly   329 YYYVLH----PSISHEPFTTKEDMMLFAAVEEYNGKFHCF--------PRSLFPNRS------LT 375
            ...::.    |:||  .|.|.   :|....|.....|:..        |..||.|:|      .:
plant   177 MLQIITPKAIPNIS--SFKTN---LLNPKPEPVVNSFNTNSVNPKPDPPAGLFINQSGITPEAAS 236

  Fly   376 QLRTRYHNVLAQRNKTDSWSVQDDTRLMSFVTQYGASQWLNCA-------TFLGNHTRTSCRTRF 433
            .....|.||         |...:|.:|...||.  :.:.||.|       |.:.:|.||.....:
plant   237 DFIPSYENV---------WDGFEDNQLPGLVTV--SQESLNTAKPGTSTTTKVNDHIRTGMMPCY 290

  Fly   434 LVIKKFLEQNPNAKVEDLPRRRSKKVSLVNSDNWAQR------LQEWQEDPESLVNDNPPKGTRV 492
            .. .:.||......|...|...|     :|..:.||.      |::|::..:...:|:..|    
plant   291 YG-DQLLETPSTGSVSVSPETTS-----LNHPSTAQHSSGSDFLEDWEKFLDDETSDSCWK---- 345

  Fly   493 RGPKSKKARIERQAESFSRLSKVDIEFCNFFKFSYNLTLSTPKTFPVP 540
                           ||                   |.|::|.:.|||
plant   346 ---------------SF-------------------LDLTSPTSSPVP 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pbp95NP_649760.1 SANT <194..240 CDD:473887 11/25 (44%)
SANT 229..276 CDD:197842 13/48 (27%)
Myb_DNA-bind_6 287..350 CDD:372817 15/69 (22%)
SANT 392..438 CDD:197842 12/52 (23%)
MYB39NP_567540.2 PLN03091 1..>129 CDD:215570 23/78 (29%)

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