DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pbp95 and MYB3R-3

DIOPT Version :10

Sequence 1:NP_649760.1 Gene:Pbp95 / 40949 FlyBaseID:FBgn0037540 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001327447.1 Gene:MYB3R-3 / 820094 AraportID:AT3G09370 Length:518 Species:Arabidopsis thaliana


Alignment Length:435 Identity:97/435 - (22%)
Similarity:170/435 - (39%) Gaps:96/435 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   287 WSEEDNDKLRAIVDRNTANSVINWKKVVEYFPDKSKSTLIGRYYYVLHPSISHEPFTTKEDMMLF 351
            |:.|:::.||..||.....|   ||.:.:.|||:::...:.|:..||:|.:...|:|.:||..:.
plant    94 WTPEEDETLRQAVDTFKGKS---WKNIAKSFPDRTEVQCLHRWQKVLNPDLIKGPWTHEEDEKIV 155

  Fly   352 AAVEEYN-GKFHCFPRSLFPNRSLTQLRTRYHNVLAQRNKTDSWSVQDDTRLMSFVTQYGASQWL 415
            ..||:|. .|:....:|| |.|...|.|.|:||.|......|:|:.:::..||:....:| ::|.
plant   156 ELVEKYGPAKWSIIAQSL-PGRIGKQCRERWHNHLNPDINKDAWTTEEEVALMNAHRSHG-NKWA 218

  Fly   416 NCATFL--------GNHTRTSC--RTRFLVIKKFLEQNPNAK--VEDLPRRRS----KKV--SLV 462
            ..|..|        .||..:|.  ::.|.::...|......:  |.|...:||    |:|  |:.
plant   219 EIAKVLPGRTDNAIKNHWNSSLKKKSEFYLLTGRLPPPTTTRNGVPDSVTKRSSSAQKRVFGSVA 283

  Fly   463 NSDNWAQRLQEWQEDPESLVNDNPPKGTRVRGPKSKKARIERQAESFSRLSKVDIEFCNFFKFSY 527
            .:.:....:....||....:|.:.|              :| :..:.||::.::       :::.
plant   284 QTSSVTTDVNNLAEDGNGQINSSVP--------------VE-EVVAASRMTSLN-------EYAR 326

  Fly   528 NLTLSTPKTFPVPKDVYNLAYVIRALAYKPPI---RPSLLQNIFMPNDVLKCYNSM--------- 580
            :..|..|:..|......|..|   .|.|.|.|   |.|.:....|..:...|..|.         
plant   327 SPQLPNPEPLPENGGAANNGY---HLYYTPQIDYYRASEVDTQRMYGNECGCSPSASPVSFFTPP 388

  Fly   581 -IRNLPDEEGDMKSP--------LLPPNWSTMMGFRALCIL---SGDCRKDTETRSFE------- 626
             .||:.......:||        ...||..::...|...::   :.:.:|..|.:..:       
plant   389 PCRNVHSNGSTPRSPESYLREAGRTYPNTPSIFRKRRPRVVVQDNNNAKKTDEAKEVDQKVNDGK 453

  Fly   627 ------------YNESLPPIQLFRKRLQALFYRTTL--LSRLESQ 657
                        ||.| ||.::..|| .|:|....|  :||.|.:
plant   454 DSSEIQNNGSNAYNLS-PPYRIRSKR-TAVFKSRQLEFISREEEK 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pbp95NP_649760.1 SANT <194..240 CDD:473887
SANT 229..276 CDD:197842
Myb_DNA-bind_6 287..350 CDD:372817 20/62 (32%)
SANT 392..438 CDD:197842 12/55 (22%)
MYB3R-3NP_001327447.1 Myb_DNA-bind_6 94..154 CDD:372817 20/62 (32%)
REB1 140..>254 CDD:227476 30/115 (26%)
Blue background indicates that the domain is not in the aligned region.

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