DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pbp95 and MYB2

DIOPT Version :10

Sequence 1:NP_649760.1 Gene:Pbp95 / 40949 FlyBaseID:FBgn0037540 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_182241.1 Gene:MYB2 / 819332 AraportID:AT2G47190 Length:273 Species:Arabidopsis thaliana


Alignment Length:283 Identity:58/283 - (20%)
Similarity:105/283 - (37%) Gaps:82/283 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   394 WSVQDDTRLMSFVTQYGASQWLNCATFLG-NHTRTSCRTRFLVIKKFLEQNPNAKVEDLPRRRSK 457
            |:.::|..|::||:.:|.::|.:.|...| ..|..|||.|:|   .:|  .|:.:..::......
plant    25 WTEEEDAILVNFVSIHGDARWNHIARSSGLKRTGKSCRLRWL---NYL--RPDVRRGNITLEEQF 84

  Fly   458 KVSLVNSDNWAQRLQEWQEDPESLV--NDNPPKGTRVRGPKSKKARIERQAESFSRLSKVDIEFC 520
            .:..::| .|..|   |.:..:.|.  .||..|       ...:.|:::||:..    :.|:. .
plant    85 MILKLHS-LWGNR---WSKIAQYLPGRTDNEIK-------NYWRTRVQKQAKHL----RCDVN-S 133

  Fly   521 NFFKFSYNLTLSTPKTFPVPKDVYNL--------AYVIRALAYKP--------PIRPSLLQ---- 565
            |.||       .|.:...:|:.|..:        ...:.::...|        |:.|..:|    
plant   134 NLFK-------ETMRNVWMPRLVERINAQSLPTTCEQVESMITDPSQPVNEPSPVEPGFVQFSQN 191

  Fly   566 --NIFMPNDVLKCYNSMIRNLPDEE-GDMKSPLL-----PPNWSTMMG-FRALCILSGD------ 615
              ..|:|...|...:|   |.|.|. .|::..::     .|:..|..| |.....:.||      
plant   192 HHQQFVPATELSATSS---NSPAETFSDVRGGVVNGSGYDPSGQTGFGEFNDWGCVGGDNMWTDE 253

  Fly   616 ----------CRKDTETRSFEYN 628
                      |   .:|.|:.||
plant   254 ESFWFLQDQFC---PDTTSYSYN 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pbp95NP_649760.1 SANT <194..240 CDD:473887
SANT 229..276 CDD:197842
Myb_DNA-bind_6 287..350 CDD:372817
SANT 392..438 CDD:197842 15/44 (34%)
MYB2NP_182241.1 PLN03212 20..>123 CDD:178751 26/113 (23%)
Blue background indicates that the domain is not in the aligned region.

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