DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pbp95 and MYB104

DIOPT Version :10

Sequence 1:NP_649760.1 Gene:Pbp95 / 40949 FlyBaseID:FBgn0037540 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_180263.5 Gene:MYB104 / 817236 AraportID:AT2G26950 Length:382 Species:Arabidopsis thaliana


Alignment Length:387 Identity:86/387 - (22%)
Similarity:134/387 - (34%) Gaps:129/387 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   383 NVLAQRNKT---DSWSVQDDTRLMSFVTQYGASQWLNCATFLG-NHTRTSCRTRFL-VIKKFLEQ 442
            |.|....||   ..|..::|..|..:|.|||...|.:.....| .|...|||.|:: .:|..|::
plant     7 NDLLAMKKTFTKSKWKPEEDRILKDYVIQYGDRTWTHVPKRTGLPHNPASCRFRWMNHLKPSLKK 71

  Fly   443 NPNAKVEDLPRRRSKKVSLVNSDNWAQRLQEW--QEDPESLVNDNPPKGTRVRG------PKSKK 499
            .|....|:   :|..::..|..:.|:|..:|:  :.|.| :.|....:..|::|      |...:
plant    72 GPFTDEEE---KRVLQLHAVLGNKWSQMAREFPGRTDNE-IKNFWNARRMRLKGKGLPVYPDEVR 132

  Fly   500 ARIERQAESFSRLSKVDIEFCNFFKFSYNLTLSTPKTFPVPKDVYNLA------YVIRALAYKPP 558
            .:..|.|..:.    |.:|..|......:|.....:.   |:::.|||      |....||...|
plant   133 EQAIRTAAQYG----VKVELLNAHYSQDSLMAGNVEK---PQELNNLALNQCSPYYQSTLANVQP 190

  Fly   559 IR----------------------PSLLQNIFMPNDVLKCYNSMIRNLPDEE--GDM--KSPLLP 597
            .|                      |:||.|.::        .|....|||..  |::  .||.:|
plant   191 SRNRVMEPETTFPFTGGSAMNEQNPTLLCNPYV--------ESTQEQLPDSHLFGNVTYSSPPMP 247

  Fly   598 ----------PNWSTMMGFRALCILSGDCRKDTETRSF---EYNE--SLPPIQLFRKRLQALFYR 647
                      |::   .||        |..:  |..||   :||.  :|.|            :.
plant   248 LIHEVENLELPSF---QGF--------DFHE--EPSSFGAEQYNPMLNLEP------------HN 287

  Fly   648 TTLLSRLESQLFTDLPSALVSLPRPKHDYAKMGTHVELIDP----------EPAPQNDLKSE 699
            |.:.|.|..|..||.||:.               :.||:|.          ...|:.|..||
plant   288 TLVQSPLIGQTPTDFPSSF---------------YDELLDELLESVVNGSLGEIPKTDTSSE 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pbp95NP_649760.1 SANT <194..240 CDD:473887
SANT 229..276 CDD:197842
Myb_DNA-bind_6 287..350 CDD:372817
SANT 392..438 CDD:197842 14/47 (30%)
MYB104NP_180263.5 PLN03091 13..>121 CDD:215570 29/111 (26%)
Blue background indicates that the domain is not in the aligned region.

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