DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pbp95 and snapc4

DIOPT Version :9

Sequence 1:NP_649760.1 Gene:Pbp95 / 40949 FlyBaseID:FBgn0037540 Length:721 Species:Drosophila melanogaster
Sequence 2:XP_009300052.1 Gene:snapc4 / 561241 ZFINID:ZDB-GENE-030131-5794 Length:1598 Species:Danio rerio


Alignment Length:527 Identity:124/527 - (23%)
Similarity:229/527 - (43%) Gaps:56/527 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DDADDLRINQQQLMDEI------SALLQNTAKPS---------AANALQLNQELQRRLMQVRTKI 51
            ||.:..|:..|:.::|:      .|.|:|..:.|         :|:.|:|.|.::..|..    .
Zfish    94 DDLETERLRIQREIEELENALGADAALENVLQDSDHDTDSSEDSADDLELPQNVETCLQM----N 154

  Fly    52 LAMLQVVRARFSRNEDILVRRLRPRSHF-----GP-NSL-NLSGAILRKGTFRFKGNLFFRD-ID 108
            |...:|::.:.:..|.:|:...:.:...     || ||: ::.|...:|....:....:|:| :.
Zfish   155 LVYQEVLKEKLAELEQLLIENQQQQKEIEVQLSGPGNSIFSVPGVPPQKQFLGYFLKPYFKDKLT 219

  Fly   109 GRSCPNNEDYEARCHTEMFPTD-FDMHSRHVW--TLLDK---KNVIMGIKQQLLEHRAHSTNALP 167
            |...|.||:.:.|......|.| ..:.....|  |||..   ::.:..:.|..|....:.:|.|.
Zfish   220 GLGPPANEETKERMKHGSIPVDNLKIKRWEGWQKTLLTNAVARDTMKRMLQPKLSKMEYLSNKLC 284

  Fly   168 SGSLKRKP--------IERHLS---TLVSLLATADSSFSIDWNQISTLDLEYRHSPYSCEAMWRV 221
            ....:.|.        ||:.::   ||.......|.....||::||.:|.|........:..|:.
Zfish   285 RAEGEEKEQLKAQIELIEKQIAEIRTLKDDQLLGDLQDDHDWDKISNIDFEGLRQADDLKRFWQN 349

  Fly   222 YLTPDLRRDDWSPEEDETLLAVATANRMQNWELIAASL-DRRSDYQCFVRFHTALRFLLEPKNSH 285
            :|.|.:.:..|..:|...|.|||...:|.:|:.||.:| ..|:.:.|   |.|..|::.:.....
Zfish   350 FLHPSINKSVWKQDEIYKLQAVAEEFKMCHWDKIAEALGTNRTAFMC---FQTYQRYISKTFRRT 411

  Fly   286 RWSEEDNDKLRAIVDRNTANSVINWKKVVEYFPDKSKSTLIGRYYYVLHPSISHEPFTTKEDMML 350
            .|:||::|.||.:|::....:.|.:.::..:...:..|.|..|:..||.||:...|::.:||.:|
Zfish   412 HWTEEEDDLLRELVEKMRIGNFIPYIQMSHFMVGRDGSQLAYRWTSVLDPSLKKGPWSKEEDQLL 476

  Fly   351 FAAVEEYNGKFHCFPRSLFPNRSLTQLRTRYHNVLAQRNKTDSWSVQDDTRLMSFVTQYGASQWL 415
            ..||.:|..:.....|:..|.|:.:..|.||.:.|.:..|..:||..:...|...|.:||..:|.
Zfish   477 RNAVAKYGTREWGRIRTEVPGRTDSACRDRYLDCLRETVKKGTWSYAEMELLKEKVAKYGVGKWA 541

  Fly   416 NCATFLGNHTRTSCRTRFLVI---KKFLEQNPNAKVEDLPR-RRSKKVSLVNSDNWAQRLQEWQE 476
            ..|:.:.|.....|..::.::   ||.|::..::.....|| :|.|.:..|..:.:...    ..
Zfish   542 KIASEIPNRVDAQCLHKWKLMTRSKKPLKRPLSSITTSYPRNKRQKLLKTVKEEMFFNS----SS 602

  Fly   477 DPESLVN 483
            |.||.:|
Zfish   603 DDESQIN 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pbp95NP_649760.1 DUF883 4..>74 CDD:295076 16/84 (19%)
SANT <194..240 CDD:304392 11/45 (24%)
SANT 229..276 CDD:197842 15/47 (32%)
Myb_DNA-binding 229..275 CDD:278669 15/46 (33%)
Myb_DNA-bind_6 287..350 CDD:290632 18/62 (29%)
SANT 392..438 CDD:197842 10/48 (21%)
Myb_DNA-binding 393..437 CDD:278669 10/46 (22%)
snapc4XP_009300052.1 SANT 353..406 CDD:304392 17/55 (31%)
SANT 410..461 CDD:197842 13/50 (26%)
Myb_DNA-bind_6 413..476 CDD:290632 18/62 (29%)
Myb_DNA-binding 465..511 CDD:278669 13/45 (29%)
SANT 465..507 CDD:197842 11/41 (27%)
SANT 517..560 CDD:197842 10/42 (24%)
Myb_DNA-binding 517..559 CDD:278669 10/41 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006126
OrthoInspector 1 1.000 - - oto41790
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR46621
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2047
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
55.040

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