DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pbp95 and mybl1

DIOPT Version :9

Sequence 1:NP_649760.1 Gene:Pbp95 / 40949 FlyBaseID:FBgn0037540 Length:721 Species:Drosophila melanogaster
Sequence 2:XP_005162808.1 Gene:mybl1 / 558540 ZFINID:ZDB-GENE-041111-281 Length:743 Species:Danio rerio


Alignment Length:589 Identity:117/589 - (19%)
Similarity:204/589 - (34%) Gaps:183/589 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   280 EPKNSHR------WSEEDNDKLRAIVDRNTANSVINWKKVVEYFPDKSKSTLIGRYYYVLHPSIS 338
            |||||.|      ||.::::||:.:|::...:   |||.:..|||.::......|:..||:|.:.
Zfish    24 EPKNSKRTLCKIKWSRDEDEKLKKLVEQQGTD---NWKLIANYFPTRTDGQCQHRWQKVLNPELV 85

  Fly   339 HEPFTTKEDMMLFAAVEEYNGKFHCFPRSLFPNRSLTQLRTRYHNVLAQRNKTDSWSVQDDTRLM 403
            ..|:|.:||..:...|.:|..|...........|...|.|.|:||.|....|..||:.::|..:.
Zfish    86 KGPWTKEEDQRVIELVHKYGPKRWSVIAKHLQGRIGKQCRERWHNHLNPEVKKSSWTQEEDRIIY 150

  Fly   404 SFVTQYGASQWLNCATFLGNHTRTSCRT-------RFLVIKKFLEQNPNAKVEDLPRRRSKKVS- 460
            ....:.| ::|...:..|...|..|.:.       |.:..:.:|::...:...|..:::..|.| 
Zfish   151 EAHKRLG-NRWAEISKLLPGRTDNSIKNHWNSTMRRKVEHEGYLQEGNKSYNSDPGQKKRPKSSP 214

  Fly   461 -----------LVNSDNWAQRLQEWQEDPESLVN-------------DNPPKGTRVRGPK----S 497
                       :::..:...|.....:..:.|.|             |:|.|..|::..:    |
Zfish   215 TVEYPHDQNQPILSGQSQPPRYPYRSQSAQCLENINVRISSFVSPFHDDPDKEKRIKELELLLMS 279

  Fly   498 KKARIERQA-----ESFSRLS--------------------KVDI-------------------- 517
            .::.:.||:     ||:|..|                    .|.|                    
Zfish   280 AESEVRRQSGPRNPESYSSWSDSLPDDSVESVEDRGVEDGRSVSIPLPVSPSKFLAAEASAVLST 344

  Fly   518 -----EFCNFFKF---------------SYNLTLSTPKTFPV-PKDV--YNLAYVIRALAYKPPI 559
                 ||....:.               |::|:.|.|...|. |.||  ..||:.|.|...:...
Zfish   345 LETIPEFAETMELIDSVSRDPLAWSDVTSFDLSESGPSPKPTNPADVCTETLAFPINAPTVQTMT 409

  Fly   560 RP----SLLQNIFMPNDVLKCYN----SMIRNLPDEEGDMKSPLLPPNWSTMMGFRALCILSGDC 616
            ||    |..::..:||..:..::    |:.|....|.|| :||....:.|.:..       ||:.
Zfish   410 RPCAAVSQGKSGTLPNTCMNRFSSPPTSICRKKRREGGD-QSPAEERSCSYIDN-------SGNS 466

  Fly   617 RKDTETRSFEYNESLPPIQLFRKRLQALFYRTTLLS-----RLESQLFTDLP----SALVSLPR- 671
            .|.|..:...::    |.|.|.            :|     .|::...|..|    ..|::.|. 
Zfish   467 PKHTPVKGLPFS----PSQFFN------------VSGGEPLSLDNPALTSTPVCGQKCLLNTPHQ 515

  Fly   672 ----PKHDYAKMG-----THVELIDPEPAPQNDLKS----------------EPLS--ENEVINT 709
                |||.....|     .|..::...|......|:                :||:  |.::...
Zfish   516 KETTPKHQKENAGFRTPKLHKNIVVHTPRTPTPFKNALAAQEKMHGPLRMVPQPLALLEEDIREV 580

  Fly   710 VKQE 713
            :|:|
Zfish   581 LKEE 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pbp95NP_649760.1 DUF883 4..>74 CDD:295076
SANT <194..240 CDD:304392
SANT 229..276 CDD:197842
Myb_DNA-binding 229..275 CDD:278669
Myb_DNA-bind_6 287..350 CDD:290632 19/62 (31%)
SANT 392..438 CDD:197842 9/52 (17%)
Myb_DNA-binding 393..437 CDD:278669 9/50 (18%)
mybl1XP_005162808.1 SANT 36..82 CDD:197842 14/48 (29%)
Myb_DNA-bind_6 37..97 CDD:290632 19/62 (31%)
SANT 86..134 CDD:197842 14/47 (30%)
Myb_DNA-binding 86..132 CDD:278669 13/45 (29%)
SANT 138..185 CDD:197842 8/47 (17%)
Myb_DNA-binding 138..183 CDD:278669 8/45 (18%)
LMSTEN 245..287 CDD:285262 7/41 (17%)
Cmyb_C 477..638 CDD:286408 21/124 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5147
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2047
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.930

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