DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pbp95 and dmtf1

DIOPT Version :9

Sequence 1:NP_649760.1 Gene:Pbp95 / 40949 FlyBaseID:FBgn0037540 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001002665.1 Gene:dmtf1 / 436938 ZFINID:ZDB-GENE-040718-413 Length:645 Species:Danio rerio


Alignment Length:696 Identity:125/696 - (17%)
Similarity:217/696 - (31%) Gaps:212/696 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 FFRDIDGR---SCPNN--EDYEARCHTEMFPTDFDMHSRHVWTLLDKKNVIMGIKQQLLEHRAHS 162
            |.:|.||.   .||.|  ||..:...||      .:|.|...:..|      |...|......:|
Zfish    20 FTQDTDGNIILHCPQNDGEDLGSDETTE------PVHKRIRLSSED------GEDPQDSASTEYS 72

  Fly   163 TNALPSGSLKRKPIERHLSTLVSLLATADSSFSIDWNQISTLDLEYRHSPYSCEAMWRVYLTPDL 227
            ...||                   :...|.||.:........|.|.....          |:...
Zfish    73 VVTLP-------------------ITDGDESFEVTMTATEMRDEELESDD----------LSETT 108

  Fly   228 RRDDWSPEEDETLLAVATANRMQNWELIAASLDRRSDYQCFVRFHTALRFLLEPKNSHR-----W 287
            .:|..:.::.|.:.||:     |.|      ...:.|....|            ...|:     |
Zfish   109 GKDSSAQKKGEDVSAVS-----QAW------FTTKEDKDTLV------------NKGHKWKQGMW 150

  Fly   288 SEEDNDKLRAIVD--------RNTANSVINWKKVVEYFPDKSKSTLIG---------RYYYVLHP 335
            |:|:.|.|...::        ::.|..:....|  |...|..:|...|         |....::.
Zfish   151 SKEEIDLLMTNIELYLKNRGIQDPAEIIFEMSK--EERKDFYRSIACGLNRPLFAVYRRVLRMYD 213

  Fly   336 SISHEPFTTKEDMMLFAAVEEYNGKFHCFPRSLFPNRSLTQLRTRYHNVLAQRNKTDSWSVQDDT 400
            :.:|....|.|::.....:.:.:|.......|.. .||.:.::.|. .::.....|..|:.:::.
Zfish   214 NRNHVGKYTDEEINKLKELRQKHGNDWATIGSAL-GRSASSVKDRC-RLMKDTCNTGKWTEEEER 276

  Fly   401 RLMSFVTQYGASQ----------WLNCATFLGNHTRTSCRTRFLVIKKFLEQNPN--AKVEDLPR 453
            ||...|.:...::          |.:.|..:|..:...||:::|....:.:....  .|.:|:  
Zfish   277 RLAEVVHELTGTEAGDVVTQGVSWASVAELVGTRSEKQCRSKWLNYLNWKQSGGTEWTKEDDI-- 339

  Fly   454 RRSKKVSLVNSDNWAQRLQEWQEDPESLVN-DNPPKG-TRVRGP---KSKKARIERQAESFSRLS 513
                        |..:|:.|.:.:.|:.:| |....| :.||.|   :||...|:||..:...| 
Zfish   340 ------------NLVRRIAELEVEDENEINWDILASGWSSVRSPQWLRSKWWTIKRQVANHKEL- 391

  Fly   514 KVDIEFCNFFKFSYNLTLSTPKTFPV-----------PKDVYNLAYVI--RALAYKPPIRPSLLQ 565
                                  .|||           |....|...|:  |:....|....:|..
Zfish   392 ----------------------PFPVLLKGLQDVVEAPPSTMNKVVVVGSRSANASPSPVTALQI 434

  Fly   566 NIFMPNDVLKCYNSMIRNLPDEEGDMKSPLLPPNWSTMMGFRALCILSGDCRKDTETRSFEY--- 627
            .:.:|..:     :.:.:.....|...|..:..|...:..|.   :|.....:.|.|....:   
Zfish   435 PVQIPVQI-----THVSSSDGSSGTSDSETITLNSGALQTFE---LLPSFHLQPTGTPGTYFLQT 491

  Fly   628 --NESLPPIQLFRKRLQALFYRTTLLSRLES----------QLFTDLPSALVSLPRPKHDYAKMG 680
              |:|||        |......|..|:...|          .|.||..:..|.:..|       |
Zfish   492 GTNQSLP--------LTLSANPTVTLTAAASPSSPDQIILHSLTTDTENVTVQMSHP-------G 541

  Fly   681 THVELIDPE----PAPQNDL-------KSEPLSENEVINTVKQELE 715
            ..::.:..|    |..|::|       |.|| |||:....:::..|
Zfish   542 IIIQTVTSEDLADPLGQSELEGEQVLVKEEP-SENQTNPAIEEPSE 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pbp95NP_649760.1 DUF883 4..>74 CDD:295076
SANT <194..240 CDD:304392 6/45 (13%)
SANT 229..276 CDD:197842 8/46 (17%)
Myb_DNA-binding 229..275 CDD:278669 8/45 (18%)
Myb_DNA-bind_6 287..350 CDD:290632 15/79 (19%)
SANT 392..438 CDD:197842 10/55 (18%)
Myb_DNA-binding 393..437 CDD:278669 10/53 (19%)
dmtf1NP_001002665.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 34..71 10/48 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 95..119 4/33 (12%)
SANT 219..264 CDD:197842 7/46 (15%)
Myb_DNA-bind_6 222..278 CDD:290632 9/57 (16%)
SANT 268..324 CDD:197842 10/55 (18%)
Myb_DNA-binding 268..323 CDD:278669 10/54 (19%)
SANT 330..383 CDD:197842 15/66 (23%)
SANT 332..382 CDD:238096 14/63 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 568..645 7/20 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2047
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.030

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