DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pbp95 and Mybl1

DIOPT Version :10

Sequence 1:NP_649760.1 Gene:Pbp95 / 40949 FlyBaseID:FBgn0037540 Length:721 Species:Drosophila melanogaster
Sequence 2:XP_038965321.1 Gene:Mybl1 / 297783 RGDID:1306940 Length:774 Species:Rattus norvegicus


Alignment Length:526 Identity:101/526 - (19%)
Similarity:168/526 - (31%) Gaps:184/526 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   205 DLEYRHSPY------SCEAMWRVYLTPDLRRDDWSPEEDETLLAVATANRMQNWELIAASLDRRS 263
            ||:|....|      ..:.:|        .|..|:.:||:.|..:...:...:|.|||:.|..||
  Rat    36 DLQYADHDYEVPQQKGLKKLW--------NRVKWTRDEDDKLKKLVEQHGTDDWTLIASHLQNRS 92

  Fly   264 DYQCFVRFHTALRFLLEPKNSHRWSEEDNDKLRAIVDRNTANSVINWKKVVEYFPDKSKSTLIGR 328
            |:||                .|||.:                                       
  Rat    93 DFQC----------------QHRWQK--------------------------------------- 102

  Fly   329 YYYVLHPSISHEPFTTKEDMMLFAAVEEYNGKFHCFPRSLFPNRSLTQLRTRYHNVLAQRNKTDS 393
               ||:|.:...|:|.:||..:...|::|..|...........|...|.|.|:||.|....|..|
  Rat   103 ---VLNPELIKGPWTKEEDQRVIELVQKYGPKRWSLIAKHLKGRIGKQCRERWHNHLNPEVKKSS 164

  Fly   394 WSVQDDTRLMSFVTQYGASQWLNCATFLGNHTRTSCRTRFLVIKKFLEQNPNAKVEDLPRRRSKK 458
            |:.::|..:.....:.| ::|...|..|...|..|       ||.........|||.        
  Rat   165 WTEEEDRIIYEAHKRLG-NRWAEIAKLLPGRTDNS-------IKNHWNSTMRRKVEQ-------- 213

  Fly   459 VSLVNSDNWAQRLQEWQEDPESLVNDNPPKGTRVRGPKSKKARIERQAESFSRLSKVDIEFCNFF 523
                                |..:.|         |.||:::..:.|.:..:.:..         
  Rat   214 --------------------EGYLQD---------GIKSERSSSKLQHKPCATMDH--------- 240

  Fly   524 KFSYNLTLSTPKTFPVPKDVYNLAYV---------IRALAYKPPIRPSLLQNIFMPNDVLKCYNS 579
                   |.|...|.:|..:....||         ::..|:        :|..|:..|..|  ..
  Rat   241 -------LQTQNQFYIPVQIPGYQYVSPDGNCVEHVQTSAF--------IQQPFVDEDPDK--EK 288

  Fly   580 MIRNLP----DEEGDMKSPLLPP------NW--STMMGFRALCILSGDCRKDTETRSFEYNESLP 632
            .|:.|.    ..|.:::...|||      :|  |.:|.......|:......||..|.:.|:::.
  Rat   289 KIKELELLLMSAENEVRRKRLPPQPGSFSSWSGSFLMDDSMSNTLNNLEEHTTEFYSMDENQTVS 353

  Fly   633 PIQLFRKRLQALFYRTTLLSRLESQLFTDLPSALVSLPRPKHDYAKMGTHVELIDPEPAPQNDLK 697
            ..|....:..|:.....|             |:|.::|    ::|:.   :|||:.:|...:|:.
  Rat   354 AQQNSPTKFLAVEANAVL-------------SSLQTIP----EFAET---LELIESDPVAWSDVT 398

  Fly   698 SEPLSE 703
            |..||:
  Rat   399 SFDLSD 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pbp95NP_649760.1 SANT <194..240 CDD:473887 9/40 (23%)
SANT 229..276 CDD:197842 15/46 (33%)
Myb_DNA-bind_6 287..350 CDD:372817 8/62 (13%)
SANT 392..438 CDD:197842 10/45 (22%)
Mybl1XP_038965321.1 Myb_DNA-bind_6 61..121 CDD:372817 24/117 (21%)
PLN03091 107..>215 CDD:215570 29/143 (20%)
LMSTEN 263..308 CDD:462332 8/54 (15%)
Cmyb_C 508..664 CDD:462753
Blue background indicates that the domain is not in the aligned region.

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