DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pbp95 and Mybl2

DIOPT Version :10

Sequence 1:NP_649760.1 Gene:Pbp95 / 40949 FlyBaseID:FBgn0037540 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001417114.1 Gene:Mybl2 / 296344 RGDID:1308474 Length:705 Species:Rattus norvegicus


Alignment Length:513 Identity:106/513 - (20%)
Similarity:192/513 - (37%) Gaps:134/513 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   278 LLEPKNSH---RWSEEDNDKLRAIVDRNTANSVINWKKVVEYFPDKSKSTLIGRYYYVLHPSISH 339
            |||.:::.   :|:.|:::.|||:| |.....  :||.:..:||:::......|:..||:|.:..
  Rat    22 LLEQRDNKCKVKWTHEEDELLRALV-RQFGQQ--DWKFLASHFPNRTDQQCQYRWLRVLNPDLVK 83

  Fly   340 EPFTTKEDMMLFAAVEEYNGKFHCFPRSLFPNRSLTQLRTRYHNVLAQRNKTDSWSVQDDTRLMS 404
            .|:|.:||..:...|::|..|...........|...|.|.|:||.|....|...|:.::| |::.
  Rat    84 GPWTKEEDQKVIELVKKYGTKQWTLIAKHLKGRLGKQCRERWHNHLNPEVKKSCWTEEED-RIIC 147

  Fly   405 FVTQYGASQWLNCATFLGNHTRTSCRTRF-LVIKKFLEQN--PNAKVEDLPRRRSKKVSL---VN 463
            ...:...::|...|..|...|..:.:..: ..||:.::..  ||..      |..|.|.|   :.
  Rat   148 EAHKVLGNRWAEIAKMLPGRTDNAVKNHWNSTIKRKVDTGGFPNES------RDCKPVYLLLELE 206

  Fly   464 SDNWAQRLQEWQEDPESLVNDNPPKGTRVRGPKSKK--------ARIERQAESFSRLSKVDI-EF 519
            ..::.|.:|. .|.|.|||:..|...:.|:..:|.:        ::..:|....:.|.:|.. |.
  Rat   207 DKDYQQNVQP-VEGPGSLVSSWPLAPSTVKEEESSEEEAAVATTSKEHKQEPVPTDLGEVRTPEP 270

  Fly   520 CNFFKFSYNLTLSTPKTFPVPKDVYNLAYVIRALAYK----------PPIRPSLLQNIFMPNDVL 574
            ..|.|..|. ..|:|:|               :|.||          |.:..||.:.:       
  Rat   271 LEFLKREYQ-EESSPET---------------SLPYKWVVEAANLLIPAVESSLSEAL------- 312

  Fly   575 KCYNSMIRNLPDEEGDMKSPLLPPNWSTMMGFRALCILSGDCRKDTETRSFEYNESLPPIQL--- 636
                .:|.:.||...|:....||                       |..|.|.:.:..|:||   
  Rat   313 ----DLIESDPDAWCDLSKFDLP-----------------------EEPSAEGSVNSSPVQLQTP 350

  Fly   637 --FRKRLQALFYRTTLLS-------RLESQLFTDLPSA----LVSL-PRPKHDYAKMGTHVELID 687
              .::..|||.:......       ||:....:||..:    |:.: |..:...:.:||...::.
  Rat   351 QQQQQHQQALSFHQAATPGPSVTEYRLDGHTISDLSRSSRGELIPISPSTEFGGSGIGTPPSVLK 415

  Fly   688 PE--------PAPQND------------------LKSEPLSENEVIN--TVKQELEME 717
            .:        |..:|.                  :|:.|.|.::.:|  ..:..||:|
  Rat   416 RQKKRRVALSPVTENSASLSFLDSCNSLTPKSTPVKTLPFSPSQFLNFWNKQDTLELE 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pbp95NP_649760.1 SANT <194..240 CDD:473887
SANT 229..276 CDD:197842
Myb_DNA-bind_6 287..350 CDD:372817 19/62 (31%)
SANT 392..438 CDD:197842 8/46 (17%)
Mybl2NP_001417114.1 None
Blue background indicates that the domain is not in the aligned region.

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