DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pbp95 and reb1

DIOPT Version :9

Sequence 1:NP_649760.1 Gene:Pbp95 / 40949 FlyBaseID:FBgn0037540 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001342963.1 Gene:reb1 / 2539930 PomBaseID:SPBC1198.11c Length:504 Species:Schizosaccharomyces pombe


Alignment Length:465 Identity:95/465 - (20%)
Similarity:166/465 - (35%) Gaps:145/465 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 NNEDYEARCHTEMFPT----DFDMHSRHVWTLLDKKNVIMGIKQQ----LLEHRAHSTNALPSGS 170
            ||.||......:..|.    :...:.|:...|:..:.....:.:|    .|:..|.|:.||.:.:
pombe    43 NNNDYSGSIEPKFSPALSIKEDGKNDRNFEALMSLQAQDSNLSEQNTSIHLDALASSSIALGNDN 107

  Fly   171 LKRKPIERHLSTLVSLLATADS-----SFSIDWNQISTLDLEYRHSPYSCEAMWRVYLTPDLRRD 230
            :........::..|:.:..:.|     |..|..::|:.:|               .:|....|  
pombe   108 VDSSAFLSKVNKGVNAMRNSTSNQTNDSILISPSEITNMD---------------PFLKGSAR-- 155

  Fly   231 DWSPEEDETLLAVATANRMQNW--------ELIAASLDRR--------------SDYQCFVRFHT 273
             |:.|..:.|     ..||||:        ..:|.||..:              .:...|.| .|
pombe   156 -WTAEHWDYL-----ERRMQNFCQTYSLDHTQVADSLHEKRLHGPLSSLVKLLVQEMPSFTR-RT 213

  Fly   274 ALRFLLE-------PKNSHRWSEEDND---KLRAIVDRNTANSVIN--WKKVVEY------FPDK 320
            .||.|..       .|.|.:.|....|   :..||:.:...|.:::  |.   ||      :..|
pombe   214 ILRHLRALYNIPGYEKYSRKNSSGRGDFGVQETAIISQEVHNFIMDQGWS---EYQFCNQIWAGK 275

  Fly   321 SKSTLIGRYYYVLHPSISH--------------EPF------TTKEDMMLFAAVEEYNGKFHCFP 365
            ...| |..:|..|:..:||              .||      :.:||..|...|.|: ||  |:.
pombe   276 CPKT-IRMFYSNLYKKLSHRDAKSIYHHVRRAYNPFEDRCVWSKEEDEELRKNVVEH-GK--CWT 336

  Fly   366 R-----SLFPNRSLTQLRTRYHNVL--AQRNKTDSWSVQDDTRLMSFVTQYGASQ-------WLN 416
            :     :..||    ..|.|:.:|:  ..:.|.::||::::|:|:..|.:....:       |..
pombe   337 KIGRKMARMPN----DCRDRWRDVVRFGDKLKRNAWSLEEETQLLQIVAELRNREDLSSDINWTL 397

  Fly   417 CATFLGNHTRTSCRTRFLVIKKF-----LEQNP--NAKVEDLPRRRSKKVSLVNSD---NWAQRL 471
            .|..||..||..||.:|..:.|.     |::|.  ..::.|         ||:|:.   :|...:
pombe   398 VAQMLGTRTRLQCRYKFQQLTKAASKFELQENVWLLERIYD---------SLLNNGGKIHWENIV 453

  Fly   472 QE----WQED 477
            :|    |..|
pombe   454 KEANGRWTRD 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pbp95NP_649760.1 DUF883 4..>74 CDD:295076
SANT <194..240 CDD:304392 7/45 (16%)
SANT 229..276 CDD:197842 13/68 (19%)
Myb_DNA-binding 229..275 CDD:278669 13/67 (19%)
Myb_DNA-bind_6 287..350 CDD:290632 19/93 (20%)
SANT 392..438 CDD:197842 14/52 (27%)
Myb_DNA-binding 393..437 CDD:278669 14/50 (28%)
reb1NP_001342963.1 REB1 2..504 CDD:227476 95/465 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5147
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2047
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.930

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