DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pbp95 and Myb

DIOPT Version :10

Sequence 1:NP_649760.1 Gene:Pbp95 / 40949 FlyBaseID:FBgn0037540 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001185843.1 Gene:Myb / 17863 MGIID:97249 Length:755 Species:Mus musculus


Alignment Length:463 Identity:96/463 - (20%)
Similarity:163/463 - (35%) Gaps:116/463 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   279 LEPKNSH------RWSEEDNDKLRAIVDRNTANSVINWKKVVEYFPDKSKSTLIGRYYYVLHPSI 337
            |.||:..      ||:.|:::||:.:|::|..:   :||.:..|.|:::......|:..||:|.:
Mouse    29 LLPKSGKRHLGKTRWTREEDEKLKKLVEQNGTD---DWKVIANYLPNRTDVQCQHRWQKVLNPEL 90

  Fly   338 SHEPFTTKEDMMLFAAVEEYNGKFHCFPRSLFPNRSLTQLRTRYHNVLAQRNKTDSWSVQDDTRL 402
            ...|:|.:||..:...|::|..|...........|...|.|.|:||.|....|..||:.::|..:
Mouse    91 IKGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRII 155

  Fly   403 MSFVTQYGASQWLNCATFLGNHTRTSCRTRFLVIKKFLEQNPNAKVEDLPRRRSKKVSLVNSDNW 467
            .....:.| ::|...|..|...|..:       ||.........|||              .:.:
Mouse   156 YQAHKRLG-NRWAEIAKLLPGRTDNA-------IKNHWNSTMRRKVE--------------QEGY 198

  Fly   468 AQRLQEWQEDP--ESLVNDNPPKGTRVRGPKSKKARIERQAESFSRLSKVDIEFCNFFKFSYNLT 530
            .|...:..:.|  .|...:|...|.....|.|:.        |.|..|.|:.|: .::..:....
Mouse   199 LQEPSKASQTPVATSFQKNNHLMGFGHASPPSQL--------SPSGQSSVNSEY-PYYHIAEAQN 254

  Fly   531 LSTPKTFPVPKDVYNLAYVIRALAYKPPIRPSLLQNIFMPNDVLKCYNSMIRNLPDEEGDMK--S 593
            :|:...:||...| |:..|       |....:.:|..:...|            |::|..:|  .
Mouse   255 ISSHVPYPVALHV-NIVNV-------PQPAAAAIQRHYNDED------------PEKEKRIKELE 299

  Fly   594 PLLPPNWSTMMGFRALCILSGDCRKDTETRSFEYNESLPPIQLFRKRLQALFYRTTLLSRLESQL 658
            .||....:.:.|.:||...:..|             |.|.            :.:|         
Mouse   300 LLLMSTENELKGQQALPTQNHTC-------------SYPG------------WHST--------- 330

  Fly   659 FTDLPSALVSLPRPKHDYAK---MGTHVELIDPEPAPQNDLKSEPLS--------ENEVINTVKQ 712
                  ::|...||..|.|.   :|.| ......||....|..|..|        :..:::.||.
Mouse   331 ------SIVDQTRPHGDSAPVSCLGEH-HATPSLPADPGSLPEESASPARCMIVHQGTILDNVKN 388

  Fly   713 ELEMEYTV 720
            .||...|:
Mouse   389 LLEFAETL 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pbp95NP_649760.1 SANT <194..240 CDD:473887
SANT 229..276 CDD:197842
Myb_DNA-bind_6 287..350 CDD:372817 18/62 (29%)
SANT 392..438 CDD:197842 9/45 (20%)
MybNP_001185843.1 SANT 40..88 CDD:197842 14/50 (28%)
REB1 89..>191 CDD:227476 25/109 (23%)
Interaction with HIPK2 and NLK. /evidence=ECO:0000269|PubMed:15082531 90..193 25/110 (23%)
LMSTEN 268..313 CDD:462332 11/63 (17%)
Transcriptional activation domain. /evidence=ECO:0000250 275..327 13/88 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 337..368 9/31 (29%)
Leucine-zipper 375..396 4/20 (20%)
Cmyb_C 516..671 CDD:462753
Blue background indicates that the domain is not in the aligned region.

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