DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pbp95 and mybl2a

DIOPT Version :10

Sequence 1:NP_649760.1 Gene:Pbp95 / 40949 FlyBaseID:FBgn0037540 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001296755.1 Gene:mybl2a / 100005189 ZFINID:ZDB-GENE-980526-529 Length:802 Species:Danio rerio


Alignment Length:495 Identity:94/495 - (18%)
Similarity:162/495 - (32%) Gaps:178/495 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 DLRR--DDWSPEEDETLLAVATANRMQNWELIAASLDRRSDYQCFVRFHTALRFLLEPK-NSHRW 287
            |:.|  ..|:..|||:|.|:......:.||||:.||..|:...|..||    ..:|:|: ....|
Zfish    22 DIERTKSKWTSAEDESLAALVGKYGRRQWELISCSLPGRTAQDCKYRF----TVVLDPELVKGTW 82

  Fly   288 SEEDNDKLRAIVDRNTANSVINWKKVVEYFPDKSKSTLIGRYYYVLHPSISHEPFTTKEDMMLFA 352
            ::|:::||..:|......|   |..:.:....:.......|::..|.||:...|:|..||:::. 
Zfish    83 TKEEDEKLIQLVSLYGDKS---WSIISKNLKGRRGKQCRERWHNHLDPSVIKTPWTAAEDLIII- 143

  Fly   353 AVEEYNGKFHCFPRSLFPNRSLTQLRTRYHNVLAQRNKTDSWSVQDDTRLMSFVTQYGASQWLNC 417
                   |.||..                                             .|:|...
Zfish   144 -------KCHCLL---------------------------------------------GSRWAQI 156

  Fly   418 ATFLGNHTRTSCRTR-FLVIKKFLEQNPNAKVEDLP------RRRSKKVSLVNSDNWAQRLQEWQ 475
            |.||...|..|.:.. :..:|:.:|:. ..|:|.|.      .::||:.|..:|.      ::.:
Zfish   157 AKFLPGRTDNSIKNHWYSTLKRKMERG-TYKMESLDLSDLGHHQKSKETSTSSSP------EKLK 214

  Fly   476 EDPESLVNDNPPK------GTRVRGP-----------KSKKARIERQAESFSRLSKVD------- 516
            ..||.|....|.|      ..:..||           .|....:..|.:::     ||       
Zfish   215 STPEPLSKTKPTKSMFLENSLKANGPPLYNCSSSPSSSSSPPTVPPQHKAY-----VDDVLQMIA 274

  Fly   517 --------IEFCNFFKFSYNLTLSTPKTFP--VPKDVYNLAYVIRALAYKPPIRPSLLQNIFMPN 571
                    .|.|.|.||..::....|:...  :...:||        ..:..|:|.|::.:    
Zfish   275 EDMLPLNFCEGCGFRKFMSSVGPQHPQLSQQMIASHLYN--------EVEKTIKPRLIRQL---- 327

  Fly   572 DVLKCYN-SMIRNLPDEEGDMKSPLLPPNWSTMMGFRALCILSGDCRKDTETRSFEYNESLPPIQ 635
              ..|.: |:..|:.....|:        |:.                       |:.|:|..:|
Zfish   328 --RNCISLSVGHNVVHVTADI--------WAN-----------------------EHTETLLAVQ 359

  Fly   636 L---------------FRKRLQALFYRTTLLSRLESQLFT 660
            |               || .|.:....||.:..:||.|.:
Zfish   360 LHFLDDDWNLHRPTVAFR-HLSSKELNTTRIGEVESVLLS 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pbp95NP_649760.1 SANT <194..240 CDD:473887 6/15 (40%)
SANT 229..276 CDD:197842 17/48 (35%)
Myb_DNA-bind_6 287..350 CDD:372817 15/62 (24%)
SANT 392..438 CDD:197842 7/46 (15%)
mybl2aNP_001296755.1 Myb_DNA-bind_6 30..90 CDD:372817 20/63 (32%)
PLN03091 76..>183 CDD:215570 27/162 (17%)
Dimer_Tnp_hAT 714..787 CDD:399013
Blue background indicates that the domain is not in the aligned region.

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