DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3223 and UBQ13

DIOPT Version :10

Sequence 1:NP_649758.1 Gene:CG3223 / 40947 FlyBaseID:FBgn0037538 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_176714.4 Gene:UBQ13 / 842845 AraportID:AT1G65350 Length:319 Species:Arabidopsis thaliana


Alignment Length:250 Identity:40/250 - (16%)
Similarity:86/250 - (34%) Gaps:71/250 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 YLKAVVTKEMHLQFDASEL-------------------EIIHHGRVLEDADTLNRTLQPNAVIHC 74
            ::|.:..|.:.|:.::|:.                   .:|..|:.|||..||...:|..:.:|.
plant    80 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADNIQKESTLHL 144

  Fly    75 FQKIKRYSPYVPPAAAEINTKHIQELFSLTSHLQISVTSRF-NILQKILAEY---PEFRRNLGAQ 135
            ..:::        ...:|   .::.|...|..|::..:... |:..||..:.   |:.:|.:.|.
plant   145 VLRLR--------GGMQI---FVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAG 198

  Fly   136 ALIRDSVLFNMLHEPEVVQNLVKDYPLICEAAPFIV----------------DTIRKELARNSSA 184
            ..:.|.             ..:.||.:..|:...:|                .||..|:..:.:.
plant   199 KQLEDG-------------RTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSGTI 250

  Fly   185 TQLQEQAASESTTSSEEENSLGAGSSSSGG--------SSSTAVAAAAAANRRDE 231
            ..::.:...:.....:::..:.||....||        ..:.|:|..|..|.:.|
plant   251 DNVKAKIQDKEGIPPDQQRLIFAGKQLEGGPGGGGGHFQKAEALAFLADYNIQKE 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3223NP_649758.1 Ubl_ubiquitin_like 9..75 CDD:340559 13/64 (20%)
UBA_like_SF 373..410 CDD:473871
UBQ13NP_176714.4 Ubl_ubiquitin 1..76 CDD:340501
Ubl_ubiquitin 77..151 CDD:340501 13/78 (17%)
Ubl_ubiquitin 152..227 CDD:340501 15/90 (17%)
Ubl1_cv_Nsp3_N-like 228..317 CDD:475130 11/77 (14%)
Blue background indicates that the domain is not in the aligned region.

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