DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3223 and RUB1

DIOPT Version :10

Sequence 1:NP_649758.1 Gene:CG3223 / 40947 FlyBaseID:FBgn0037538 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_564379.2 Gene:RUB1 / 840023 AraportID:AT1G31340 Length:156 Species:Arabidopsis thaliana


Alignment Length:71 Identity:13/71 - (18%)
Similarity:30/71 - (42%) Gaps:20/71 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 YLKAVVTKEMHLQFDASEL-------------------EIIHHGRVLEDADTL-NRTLQPNAVIH 73
            ::|.:..|.:.|:.::|:.                   .:|..|:.|||..|| :..:|..:.:|
plant     4 FVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 68

  Fly    74 CFQKIK 79
            ...:::
plant    69 LVLRLR 74

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3223NP_649758.1 Ubl_ubiquitin_like 9..75 CDD:340559 13/65 (20%)
UBA_like_SF 373..410 CDD:473871
RUB1NP_564379.2 Ubl_ubiquitin 1..76 CDD:340501 13/71 (18%)
Ubl_NEDD8 79..152 CDD:340504
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.