DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3223 and RAD23A

DIOPT Version :10

Sequence 1:NP_649758.1 Gene:CG3223 / 40947 FlyBaseID:FBgn0037538 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_173070.1 Gene:RAD23A / 838188 AraportID:AT1G16190 Length:368 Species:Arabidopsis thaliana


Alignment Length:409 Identity:88/409 - (21%)
Similarity:130/409 - (31%) Gaps:140/409 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 IIHHGRVLEDADTL--NRTLQPNAVIHCFQKIKRYSPYVPPAAAEINTKHIQELFSLTSHLQISV 111
            :||:|:||:|..||  |:..:...::....|.|..|...|.:....:|        .||  .||.
plant    46 LIHNGKVLKDETTLVENKVTEEGFLVVMLSKSKTASSAGPSSTQPTST--------TTS--TISS 100

  Fly   112 TSRFNILQKILAEYPEFRRNLGAQALIRDSVLFNMLHEPEVVQNLVKDYPLICEAAPFIVDTIRK 176
            |:                                 |..|...|::         |.|        
plant   101 TT---------------------------------LAAPSTTQSI---------AVP-------- 115

  Fly   177 ELARNSSATQLQEQAASESTTSSEEENSLGAGSS----------SSGGS--SSTAVAAAAAANRR 229
                .|::|.:|||..::|.|..:..::|.:|||          ..|||  ..|...|..||...
plant   116 ----ASNSTPVQEQPTAQSDTYGQAASTLVSGSSIEQMVQQIMEMGGGSWDKETVTRALRAAYNN 176

  Fly   230 DEMANIRQISRQQLANALANVT--PFNSLSNIAQRNADEAVQGDERPRTTSAPLAGVGG------ 286
            .|.|      ...|.:.:....  |..:||.:          |..|..|...|..|...      
plant   177 PERA------VDYLYSGIPETVTIPATNLSGV----------GSGRELTAPPPSGGPNSSPLDLF 225

  Fly   287 ---AAGTGAGSSSGAISSGSISSELLR-NELARAFQSLSQDQPAPVENMEVESG-EGP-----VP 341
               |....||...|.:       |.|| |:..:..:|:....|..::.|..|.| :.|     :.
plant   226 PQEAVSDAAGGDLGTL-------EFLRGNDQFQQLRSMVNSNPQILQPMLQELGKQNPQLLRLIQ 283

  Fly   342 E------QAATAPADDVDDEDDGGDDSD--------VLPRRYRRHRFTEQLRTMAAMGFINHTQN 392
            |      |....|.:..|.:.|..|..|        |.|..      .|.:..:.||||......
plant   284 ENQAEFLQLLNEPYEGSDGDVDIFDQPDQEMPHSVNVTPEE------QESIERLEAMGFDRAIVI 342

  Fly   393 VSYLELSDGNVEHAINLLM 411
            .::|. .|.|.|.|.|.|:
plant   343 EAFLS-CDRNEELAANYLL 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3223NP_649758.1 Ubl_ubiquitin_like 9..75 CDD:340559 9/27 (33%)
UBA_like_SF 373..410 CDD:473871 11/36 (31%)
RAD23ANP_173070.1 rad23 1..365 CDD:273167 88/409 (22%)

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