DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3223 and RUB3

DIOPT Version :10

Sequence 1:NP_649758.1 Gene:CG3223 / 40947 FlyBaseID:FBgn0037538 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_172662.1 Gene:RUB3 / 837750 AraportID:AT1G11980 Length:78 Species:Arabidopsis thaliana


Alignment Length:72 Identity:15/72 - (20%)
Similarity:32/72 - (44%) Gaps:17/72 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LKNKLSDVHPLHNIDLTRDVAYLKAVVTKE-----MHLQFDASELEIIHHGRVL-EDADTLNRTL 66
            |..|..|:    .|:||..:..:|..:.::     :|.:       |::.|:.| :|....:..|
plant     8 LTEKQIDI----EIELTDTIERIKERIEEKEGIPPVHQR-------IVYTGKQLADDLTAKHYNL 61

  Fly    67 QPNAVIH 73
            :..:|:|
plant    62 ERGSVLH 68

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3223NP_649758.1 Ubl_ubiquitin_like 9..75 CDD:340559 14/71 (20%)
UBA_like_SF 373..410 CDD:473871
RUB3NP_172662.1 Ubl_NEDD8 3..76 CDD:340504 15/72 (21%)
Blue background indicates that the domain is not in the aligned region.

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