DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3223 and AT4G05260

DIOPT Version :10

Sequence 1:NP_649758.1 Gene:CG3223 / 40947 FlyBaseID:FBgn0037538 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_192435.1 Gene:AT4G05260 / 825874 AraportID:AT4G05260 Length:259 Species:Arabidopsis thaliana


Alignment Length:148 Identity:33/148 - (22%)
Similarity:56/148 - (37%) Gaps:45/148 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   263 NADEAVQGDERPRTTSAPLAG--VGGAAGTGAGSSSGAISSGSISSELLRNELARAFQSLSQDQP 325
            |.|:.:|.:|:|     |:.|  :.|             ....:::|::.|  .|.|..:   |.
plant    77 NNDQVLQTEEQP-----PIIGDLIYG-------------EDLPLTTEVVLN--IRPFCPV---QD 118

  Fly   326 APVEN----------MEVESG--EGPVPEQAATAPADDVDDEDDGGDDSDVLPRRYRRHRFTEQL 378
            :||.|          .::..|  :.||.....|.|:|.| .|:....||.|       .:....|
plant   119 SPVRNNDQSPPSDAAKDIIKGHQDSPVRNNEQTPPSDSV-KENTNIQDSPV-------GKIILTL 175

  Fly   379 RTMAAMGFINHTQNVSYL 396
            |.|...|.|...:|:.::
plant   176 RVMPYSGKIKAAKNLHFI 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3223NP_649758.1 Ubl_ubiquitin_like 9..75 CDD:340559
UBA_like_SF 373..410 CDD:473871 6/24 (25%)
AT4G05260NP_192435.1 ubiquitin 3..70 CDD:459726
Blue background indicates that the domain is not in the aligned region.

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