DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3223 and AT4G05230

DIOPT Version :10

Sequence 1:NP_649758.1 Gene:CG3223 / 40947 FlyBaseID:FBgn0037538 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_192432.1 Gene:AT4G05230 / 825871 AraportID:AT4G05230 Length:206 Species:Arabidopsis thaliana


Alignment Length:125 Identity:30/125 - (24%)
Similarity:41/125 - (32%) Gaps:46/125 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   231 EMANIRQISRQQLANALANVTPFNSLSNI--------AQRNADEAVQGDERPRTTSAPLAG---- 283
            |...|...||.||:.:    :|..|.:||        .|.|:.|.........|...|::.    
plant    57 EQCVILNHSRIQLSIS----SPDQSRNNIQVFKTEQFPQSNSTEQTSNGHHESTVMIPMSNNNNN 117

  Fly   284 ---------VGGAAGT-------GAGSSSGAISSGSISSELLRNELARAFQ----SLSQD 323
                     |...:||       .||.:.|.          ||.|||:..|    ||.|:
plant   118 NNPKKLRVMVLPKSGTRKIPVDVNAGDNVGE----------LRKELAKIQQRFQLSLPQE 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3223NP_649758.1 Ubl_ubiquitin_like 9..75 CDD:340559
UBA_like_SF 373..410 CDD:473871
AT4G05230NP_192432.1 ubiquitin 3..72 CDD:459726 6/14 (43%)
Blue background indicates that the domain is not in the aligned region.

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