DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3223 and UBQ8

DIOPT Version :10

Sequence 1:NP_649758.1 Gene:CG3223 / 40947 FlyBaseID:FBgn0037538 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_566357.1 Gene:UBQ8 / 820137 AraportID:AT3G09790 Length:631 Species:Arabidopsis thaliana


Alignment Length:142 Identity:33/142 - (23%)
Similarity:60/142 - (42%) Gaps:20/142 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 LKAVVTKEMHLQFDASELEIIHHGRVLEDADTL-NRTLQPNAVIHCFQKIKRYSPYVPPAAAEIN 93
            :||:|..:..:|...:...:|..|:.|:|..|| :.::|..:.:|.   :.....:|.....:|.
plant   344 VKAMVQDKEGIQPQPNLQRLIFLGKELKDGCTLADYSIQKESTLHL---VLGMQIFVKLFGGKII 405

  Fly    94 TKHI---QELFSLTSHLQISVTSRFNILQKILAEYPEFR-------RNLGAQALIRDSVLFNMLH 148
            |..:   ..:.|:.:.:|..|.|..:  |:||.    ||       |.||...:..:|.|....|
plant   406 TLEVLSSDTIKSVKAKIQDKVGSPPD--QQILL----FRGGQLQDGRTLGDYNIRNESTLHLFFH 464

  Fly   149 EPEVVQNLVKDY 160
            ....:|..||.:
plant   465 IRHGMQIFVKTF 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3223NP_649758.1 Ubl_ubiquitin_like 9..75 CDD:340559 12/45 (27%)
UBA_like_SF 373..410 CDD:473871
UBQ8NP_566357.1 Ubl_ubiquitin 3..78 CDD:340501
Ubl_ubiquitin 79..154 CDD:340501
Ubl1_cv_Nsp3_N-like 155..237 CDD:475130
Ubl1_cv_Nsp3_N-like 238..318 CDD:475130
Ubl1_cv_Nsp3_N-like 319..391 CDD:475130 12/49 (24%)
Ubl1_cv_Nsp3_N-like 393..468 CDD:475130 18/80 (23%)
Ubl1_cv_Nsp3_N-like 469..551 CDD:475130 3/8 (38%)
Ubl1_cv_Nsp3_N-like 552..625 CDD:475130
Blue background indicates that the domain is not in the aligned region.

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