DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3223 and RAD23B

DIOPT Version :10

Sequence 1:NP_649758.1 Gene:CG3223 / 40947 FlyBaseID:FBgn0037538 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_002865.1 Gene:RAD23B / 5887 HGNCID:9813 Length:409 Species:Homo sapiens


Alignment Length:369 Identity:78/369 - (21%)
Similarity:115/369 - (31%) Gaps:115/369 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 NIDLTRDVAYLKAVVTKEMHLQ-FDASELEIIHHGRVLEDADTLN--RTLQPNAVIHCFQKIKRY 81
            :||....|..||..:..|.... |..:..::|:.|::|.|...|.  :..:.|.|:....|.|..
Human    16 DIDPEETVKALKEKIESEKGKDAFPVAGQKLIYAGKILNDDTALKEYKIDEKNFVVVMVTKPKAV 80

  Fly    82 SPYVP-----------------------------PAAAEINTKHIQELFSLTSHLQISVTSRFNI 117
            |...|                             ||.|..:|.......|.|:..:.:..|... 
Human    81 STPAPATTQQSAPASTTAVTSSTTTTVAQAPTPVPALAPTSTPASITPASATASSEPAPASAAK- 144

  Fly   118 LQKILAEYP------------------EFRRNL---GAQALIRDSVLFNMLHE--------PEVV 153
             |:..||.|                  ..|.||   ...||:......||:.|        .:|:
Human   145 -QEKPAEKPAETPVATSPTATDSTSGDSSRSNLFEDATSALVTGQSYENMVTEIMSMGYEREQVI 208

  Fly   154 QNLVKDYPLICEAAPFIVDTIRKELARNSSATQLQEQAASESTTSSEEENSLGAGSSSSGGSSST 218
            ..|...:.....|..:::..|..:  |.|.|.....|||                  |:|...|:
Human   209 AALRASFNNPDRAVEYLLMGIPGD--RESQAVVDPPQAA------------------STGAPQSS 253

  Fly   219 AVAAAAAA------------------NRRDEMANIRQISRQ--QLANALANVTPFNSLSNIAQRN 263
            |||||||.                  ..:.:...:|||.:|  .|..||        |..|.:.|
Human   254 AVAAAAATTTATTTTTSSGGHPLEFLRNQPQFQQMRQIIQQNPSLLPAL--------LQQIGREN 310

  Fly   264 ADEAVQGDERP----RTTSAPLAGVGGAAGTGAGSSSGAISSGS 303
            .....|..:..    :..:.|:...||..|.|.|.|.|...:||
Human   311 PQLLQQISQHQEHFIQMLNEPVQEAGGQGGGGGGGSGGIAEAGS 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3223NP_649758.1 Ubl_ubiquitin_like 9..75 CDD:340559 14/57 (25%)
UBA_like_SF 373..410 CDD:473871
RAD23BNP_002865.1 rad23 1..407 CDD:273167 78/369 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 80..175 14/96 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 236..276 14/57 (25%)
Blue background indicates that the domain is not in the aligned region.

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