Protein Alignment CG3223 and Rad23

DIOPT Version :10

• Sequence 1: NP_649758.1
• Gene: CG3223 / 40947
• FlyBaseID: FBgn0037538
• Length: 415
• Species: Drosophila melanogaster
• Sequence 2: NP_651918.2
• Gene: Rad23 / 43785
• FlyBaseID: FBgn0026777
• Length: 414
• Species: Drosophila melanogaster
• Alignment Length: 359
• Identity: 67/359 - (18%)
• Similarity: 113/359 - (31%)
• Gaps: 130/359 - (36%)

  Fly   169 FIVDTIRKELARNSSATQLQEQAASESTTSSEEENSLGAGSSSSGGSSSTAVAAAAAANRRDEMA 233
            |||..:.:: :.:|:..||..:.:::.|::.:.:.|:....::...|.|       :.|..|.:.
  Fly    68 FIVVMLTRD-SSSSNRNQLSVKESNKLTSTDDSKQSMPCEEANHTNSPS-------STNTEDSVL 124

  Fly   234 N--IRQISRQQLANALANVTPFNSLSNIAQRNADEAVQGDERPRTTSAP---------------- 280
            :  .|.:|..:|...||..    ||.:.|:.|   .:.|||..:|..:.
  Fly   125 SRETRPLSSDELIGELAQA----SLQSRAESN---LLMGDEYNQTVLSMVEMGYPREQVERAMAA 182

  Fly   281 ------------LAGVGGAAGT---------------------GAGSSSGAISSGSISSELLRNE 312
                        :.|:....||                     .|.|:..:..|.|...|.||::
  Fly   183 SYNNPERAVEYLINGIPAEEGTFYNRLNESTNPSLIPSGPQPASATSAERSTESNSDPFEFLRSQ 247

  Fly   313 ----------------LARAFQSLSQDQPAPVE----------NM-------EVESGEGPVPEQA 344
                            |....|.:.|..||.::          ||       |.|||....|...
  Fly   248 PQFLQMRSLIYQNPHLLHAVLQQIGQTNPALLQLISENQDAFLNMLNQPIDRESESGATVPPVSN 312

  Fly   345 ATAPA--DDVD-----------------------DEDDGGDDSDV-LPRRYRRHRFTEQ----LR 379
            |..|:  |:||                       ......|:.|: .|......|...|    :.
  Fly   313 ARIPSTLDNVDLFSPDLEVATSAQRSAAGTSAAHQSGSAADNEDLEQPLGVSTIRLNRQDKDAIE 377

  Fly   380 TMAAMGFINHTQNVSYLELSDGNVEHAINLLMLS 413
            .:.|:||.......:|. ..:.|.|.|.|.|:.|
  Fly   378 RLKALGFPEALVLQAYF-ACEKNEEQAANFLLSS 410

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG3223	NP_649758.1	Ubl_ubiquitin_like	9..75	CDD:340559
		UBA_like_SF	373..410	CDD:473871	10/40 (25%)
Rad23	NP_651918.2	rad23	1..413	CDD:273167	67/359 (19%)