DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3223 and ubqln1

DIOPT Version :10

Sequence 1:NP_649758.1 Gene:CG3223 / 40947 FlyBaseID:FBgn0037538 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_989221.1 Gene:ubqln1 / 394829 XenbaseID:XB-GENE-986025 Length:564 Species:Xenopus tropicalis


Alignment Length:554 Identity:111/554 - (20%)
Similarity:186/554 - (33%) Gaps:217/554 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 KEMHLQFDAS--ELEIIHHGRVLEDADTLNR-TLQPNAVIHCFQKIKRYSPYVPPAAAEINTKHI 97
            :::..:|.:|  :|.:|..|::|:|.|||:: .:.....:|...|.:..|.  ...|::.::...
 Frog    45 EDISKRFKSSTEQLVLIFAGKILKDQDTLSQHGIHDGLTVHLVIKTQNRSQ--AATASQASSSST 107

  Fly    98 QELFSLTSHLQISVT-------------------------SRFNIL----QKILAEYPEFRRNLG 133
            ....|.||....:.|                         |.|:.|    |:.|...||....:.
 Frog   108 SATNSTTSSSSTTTTTTTGTPLGLGGLGGLAGLSSLGMNASNFSELQSQMQQQLMSNPEMMVQIM 172

  Fly   134 AQALIRDSVLFNMLHEPEVVQNLVKDYP---LICEAAPFI------VDTIRK--ELARNSSATQL 187
            ....::     :||..|:::..|:...|   .:.:..|.|      .|.:|:  |||||.:  .:
 Frog   173 ENPFVQ-----SMLSNPDLMSQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLELARNPA--MM 230

  Fly   188 QEQAASESTTSSEEENSLGAGSSSSGGSSSTAVAAAAAANRR------DEMANIRQISRQQLANA 246
            ||...::....|..|       |..||.:         |.||      :.|.|..|   :|... 
 Frog   231 QEMMRNQDRALSNLE-------SIPGGYN---------ALRRMYTDIQEPMLNAAQ---EQFGG- 275

  Fly   247 LANVTPFNSLSNIAQRNADEAVQGDERPRTTSA-----PLAGVGGAAG-TGAGSSSGAISSGSIS 305
                .||.||.:    ||..|  |::..||.:.     |.|.....|| |..||::||.|:||.:
 Frog   276 ----NPFASLVS----NASNA--GNQPSRTENRDPLPNPWAPPSSTAGSTSTGSTTGANSTGSST 330

  Fly   306 S-------------------------------ELLRNELARAF-----QSLSQD----------- 323
            :                               :|::|.|:..:     |||||:           
 Frog   331 TTTTSSTLPNLGAGMFNTPGMQSLMQQITENPQLMQNMLSAPYMRSMMQSLSQNPELAAQVMQNN 395

  Fly   324 --------------QPAP-----VEN----------------MEVESG------EGP-------- 339
                          |..|     ::|                ::::.|      |.|        
 Frog   396 PLFSGNPQLQEQMRQQLPFFLQQMQNPETLSAMSNPRAMQALLQIQQGLQTLATEAPSLMPRTNP 460

  Fly   340 --------------VPEQAATAPADDVDDEDDGGDD----------SDVLPRRYRRH---RFTEQ 377
                          ||..|.|..:..:....:.|..          |...|:....:   ||..|
 Frog   461 PFGGLGSPNSSPASVPSSAPTENSSPLSGLSEPGHQQFIQQMLQALSGANPQNQNPNPEVRFQPQ 525

  Fly   378 LRTMAAMGFINHTQNVSYLELSDGNVEHAINLLM 411
            |..::||||:|...|:..|..:.|::..||..|:
 Frog   526 LEQLSAMGFLNREANLQALIATGGDINAAIERLL 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3223NP_649758.1 Ubl_ubiquitin_like 9..75 CDD:340559 11/41 (27%)
UBA_like_SF 373..410 CDD:473871 14/36 (39%)
ubqln1NP_989221.1 Ubl_PLICs 17..89 CDD:340506 11/43 (26%)
STI1 194..238 CDD:450205 12/45 (27%)
STI1 364..396 CDD:128966 8/31 (26%)
UBA_PLICs 521..560 CDD:270582 15/39 (38%)

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