DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3223 and zgc:56596

DIOPT Version :10

Sequence 1:NP_649758.1 Gene:CG3223 / 40947 FlyBaseID:FBgn0037538 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_956594.1 Gene:zgc:56596 / 393270 ZFINID:ZDB-GENE-040426-1089 Length:157 Species:Danio rerio


Alignment Length:158 Identity:35/158 - (22%)
Similarity:72/158 - (45%) Gaps:18/158 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 VHPLH----NIDLTRD--VAYLKAVVTKEMHLQFDASELEIIHHGRVLEDADTL-NRTLQPNAVI 72
            |.||.    |:.:|.:  |:.:|.:|::.:::  .||:..:::.|:.|.|...| :.::.|.|.:
Zfish     5 VKPLQGKECNVQVTENEKVSTVKELVSERLNI--PASQQRLLYKGKALADEHRLSDYSIGPEAKL 67

  Fly    73 HCFQKI--KRYSPYVPPAAAEINTK---HIQELFSLTSHLQISVTSRFNILQKILAEYPEFRRNL 132
            :...:.  :|.|..|..::|. |.|   .:.:|.|.......|......:.::::.:|....|.|
Zfish    68 NLVVRPAGERSSGAVGTSSAN-NDKGGSGVWQLLSTVLAKHFSPADAAKVQEQLIKDYERSLRQL 131

  Fly   133 GAQALIRDSVLFNMLH-EPEVVQNLVKD 159
            ....:.|  :...:|| |.||:.....|
Zfish   132 SLDDIER--LASRLLHPETEVMDTSYMD 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3223NP_649758.1 Ubl_ubiquitin_like 9..75 CDD:340559 16/66 (24%)
UBA_like_SF 373..410 CDD:473871
zgc:56596NP_956594.1 Ubl_UBL4A_like 1..72 CDD:340505 16/68 (24%)
Tugs 97..143 CDD:465528 7/47 (15%)
Blue background indicates that the domain is not in the aligned region.

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