DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3223 and nedd8

DIOPT Version :10

Sequence 1:NP_649758.1 Gene:CG3223 / 40947 FlyBaseID:FBgn0037538 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_958478.2 Gene:nedd8 / 368667 ZFINID:ZDB-GENE-030616-588 Length:89 Species:Danio rerio


Alignment Length:61 Identity:12/61 - (19%)
Similarity:26/61 - (42%) Gaps:9/61 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 DVHPLHNIDLTRDVAYLKAVVTKEMHLQFDASELEIIHHGRVLEDADT-LNRTLQPNAVIH 73
            |:.|...::..::     .|..||   .....:..:|:.|:.:.|..| .:..:|..:|:|
Zfish    16 DIEPTDKVERIKE-----RVEEKE---GIPPQQQRLIYSGKQMNDEKTAADYKIQGGSVLH 68

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3223NP_649758.1 Ubl_ubiquitin_like 9..75 CDD:340559 12/61 (20%)
UBA_like_SF 373..410 CDD:473871
nedd8NP_958478.2 Ubl_NEDD8 3..76 CDD:340504 12/61 (20%)
Blue background indicates that the domain is not in the aligned region.

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