DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3223 and Ubi-p5E

DIOPT Version :10

Sequence 1:NP_649758.1 Gene:CG3223 / 40947 FlyBaseID:FBgn0037538 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_727078.1 Gene:Ubi-p5E / 326237 FlyBaseID:FBgn0086558 Length:534 Species:Drosophila melanogaster


Alignment Length:447 Identity:73/447 - (16%)
Similarity:143/447 - (31%) Gaps:139/447 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 YLKAVVTKEMHLQFDASEL-------------------EIIHHGRVLEDADTL-NRTLQPNAVIH 73
            ::|.:..|.:.|:.:.|:.                   .:|..|:.|||..|| :..:|..:.:|
  Fly     4 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 68

  Fly    74 CFQKIKRYSPYVPPAAAEINTKHIQELFSLTSHLQISVTSRF-NILQKILAEY---PEFRRNLGA 134
            ...:::        ...:|   .::.|...|..|::..:... |:..||..:.   |:.:|.:.|
  Fly    69 LVLRLR--------GGMQI---FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 122

  Fly   135 QALIRDSVLFNMLHEPEVVQNLVKDYPLICEAAPFIV----------------DTIRKELARNSS 183
            ...:.|.             ..:.||.:..|:...:|                .||..|:..:.:
  Fly   123 GKQLEDG-------------RTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDT 174

  Fly   184 ATQLQEQAASESTTSSEEENSLGAGSSSSGGSSSTAVAAAAAANRRDEMANIRQISRQQLANAL- 247
            ...::.:...:.....:::..:.||.....|.:.:..             ||::.|...|...| 
  Fly   175 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY-------------NIQKESTLHLVLRLR 226

  Fly   248 ----------------ANVTPFNSLSNIAQRNAD-EAVQGDERPRTTSAPLAGVGGAAGTGAGSS 295
                            ..|.|.:::.|:..:..| |.:..|::      .|...|.....|...|
  Fly   227 GGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ------RLIFAGKQLEDGRTLS 285

  Fly   296 SGAISSGSISSELLRNELARAFQSLSQDQPAPVENMEVESGEGPVPEQAATAPADDVDDEDDGGD 360
            ...|...|....:||  |....|...:........:|||             |:|.:::......
  Fly   286 DYNIQKESTLHLVLR--LRGGMQIFVKTLTGKTITLEVE-------------PSDTIENVKAKIQ 335

  Fly   361 DSDVLPRRYRRHRFT----EQLRTMAAMGFINHTQNVSYLELSDGNV--EHAINLLM 411
            |.:.:|...:|..|.    |..||                 |||.|:  |..::|::
  Fly   336 DKEGIPPDQQRLIFAGKQLEDGRT-----------------LSDYNIQKESTLHLVL 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3223NP_649758.1 Ubl_ubiquitin_like 9..75 CDD:340559 13/65 (20%)
UBA_like_SF 373..410 CDD:473871 9/42 (21%)
Ubi-p5ENP_727078.1 Ubl_ubiquitin 1..76 CDD:340501 13/79 (16%)
Ubl_ubiquitin 77..152 CDD:340501 15/90 (17%)
Ubl_ubiquitin 153..228 CDD:340501 11/87 (13%)
Ubl_ubiquitin 229..304 CDD:340501 15/82 (18%)
Ubl_ubiquitin 305..380 CDD:340501 19/101 (19%)
Ubl_ubiquitin 381..456 CDD:340501
Ubl_ubiquitin 457..532 CDD:340501
Blue background indicates that the domain is not in the aligned region.

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