Protein Alignment CG3223 and Ubqln3

DIOPT Version :10

• Sequence 1: NP_649758.1
• Gene: CG3223 / 40947
• FlyBaseID: FBgn0037538
• Length: 415
• Species: Drosophila melanogaster
• Sequence 2: XP_017444687.1
• Gene: Ubqln3 / 308905
• RGDID: 1304920
• Length: 678
• Species: Rattus norvegicus
• Alignment Length: 626
• Identity: 107/626 - (17%)
• Similarity: 191/626 - (30%)
• Gaps: 247/626 - (39%)

  Fly    26 DVAYLKAVVTKEMHLQFDA--SELEIIHHGRVLEDADTLNRT-LQPNAVIHCFQKIKR------- 80
            |...::.:..|..| :|.|  ::|.:|..|::|:|.|:|.:. ::....:|...|::|
  Rat    62 DTCTIRQLKEKISH-RFKAHPNQLVLIFAGKILKDPDSLAQCGVRDGLTVHLVIKMQRRTTGTEC 125

  Fly    81 ------------------YSPY---------------------------------------VPPA 88
                              .|.|                                       ||..
  Rat   126 PAPPVSTPGPNPLELPQPNSAYPVDGSPSFSLGVLTGLSGLGLTSGSFSDQPGSLMWQHMSVPEL 190

  Fly    89 AAE-INTKHIQELFSLTSHLQISVTSRFNILQKILAEYPEFRRNLGAQALIRDSVLFNMLHEPEV 152
            .|: ::...||.|.|.|..::..|....: :|:::.:.||....|....::|.::.|  |..|.:
  Rat   191 VAQLVDDPFIQGLLSNTGLMRQLVLDNPH-MQQLIQQNPEIGHILNNPEIMRQTMEF--LRNPSM 252

  Fly   153 VQNLVKD--------------YPLICEAAPFIVD----TIRKELARNSSATQLQEQAASESTTSS 199
            :|.:::.              |.::......|:|    .::::...|..||   ...||.:||||
  Rat   253 MQEMMRSQDRALSNLESIPGGYNVLRTMYTDIMDPMLNAVQEQFGGNPFAT---ATTASTTTTSS 314

  Fly   200 EEENSLGAGSSSSGGSSSTAVAAAAAANRRDEMANIRQISRQQLANALANVTPFNSLSNIAQ--- 261
            :...:.......:..:|:..|:.:....:..:.....  ||.:|.:.|.|:..|:.|..:.:
  Rat   315 QPSRTENCDPLPNPWTSTCGVSGSRQGRQPGDQDTSE--SRNRLPSFLGNIGLFDYLQQLHETSQ 377

  Fly   262 -------------RNADEAVQGDER--PRTTSAPLAGVG-----------------------GAA 288
                         .::.|......|  |....:|..|.|                       ...
  Rat   378 ALGSYLQGTVPTPSSSQETPLSGNRVPPNLPPSPKPGSGQPLPKDSVAIKGKSSCPAFLRHSSEN 442

  Fly   289 GTGAGSS---SGAISSG------SISSEL------------------------------------ 308
            .||.|.|   ||..|:|      :::|::
  Rat   443 STGQGGSLHDSGKSSTGPSTGLPNLTSQIGDNANRSPFVSTPSSLISPTPGAPESPWLPPTGYPR 507

  Fly   309 -----LRNELARAFQSLSQDQP------APVENMEV----------------------------- 333
                 |.|::.|....|.|..|      ..:.|..|
  Rat   508 SLRSALTNQVPRMQNELHQQLPLLLHLQTAMTNPRVMQALLQIEQGLQILATEAPRLLLWFMPCL 572

  Fly   334 ----------ESGEGPV----PEQAATAPADDVDDEDDGGDDS----DVL-------PRRYR-RH 372
                      ||.||.|    |....|:....|....:.|..|    .||       |::.: ..
  Rat   573 AGLSGVIGGTESREGVVMSEDPRPTPTSQISLVQGSAELGFHSSPFLQVLQALASTNPQQLQLEA 637

  Fly   373 RFTEQLRTMAAMGFINHTQNVSYLELSDGNVEHAINLLMLS 413
            .|..||..:.||||:|...|:..|..:.|:|:.|:..|..|
  Rat   638 HFRVQLEQLRAMGFLNLEANLQALIATGGDVDAAVEKLRKS 678

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG3223	NP_649758.1	Ubl_ubiquitin_like	9..75	CDD:340559	13/51 (25%)
		UBA_like_SF	373..410	CDD:473871	13/36 (36%)
Ubqln3	XP_017444687.1	Ubl_PLICs	43..115	CDD:340506	13/53 (25%)
		UBI4	65..>176	CDD:444084	16/111 (14%)
		STI1	217..>258	CDD:450205	9/43 (21%)
		UBA_PLICs	638..675	CDD:270582	13/36 (36%)