DRSC - DRSC Integrative Ortholog Prediction Tool

DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3223 and Nedd8

DIOPT Version :10

Sequence 1:	NP_649758.1	Gene:	CG3223 / 40947	FlyBaseID:	FBgn0037538	Length:	415	Species:	Drosophila melanogaster
Sequence 2:	NP_620233.1	Gene:	Nedd8 / 25490	RGDID:	3158	Length:	81	Species:	Rattus norvegicus

Alignment Length:	40	Identity:	11/40 - (27%)
Similarity:	16/40 - (40%)	Gaps:	6/40 - (15%)

- Green bases have known domain annotations that are detailed below.

  Fly   327 PVENME-----VESGEG-PVPEQAATAPADDVDDEDDGGD 360
            |.:.:|     ||..|| |..:|........::||....|
  Rat    19 PTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTAAD 58

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG3223	NP_649758.1	Ubl_ubiquitin_like	9..75	CDD:340559
CG3223	NP_649758.1	UBA_like_SF	373..410	CDD:473871
Nedd8	NP_620233.1	Ubl_NEDD8	3..76	CDD:340504	11/40 (28%)
Nedd8	NP_620233.1	Interaction with UBE1C. /evidence=ECO:0000250\|UniProtKB:Q15843	70..72
Blue background indicates that the domain is not in the aligned region.

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