DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3223 and dsk2

DIOPT Version :10

Sequence 1:NP_649758.1 Gene:CG3223 / 40947 FlyBaseID:FBgn0037538 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_594159.1 Gene:dsk2 / 2542667 PomBaseID:SPAC26A3.16 Length:354 Species:Schizosaccharomyces pombe


Alignment Length:437 Identity:90/437 - (20%)
Similarity:150/437 - (34%) Gaps:151/437 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 IDLTRDVAYLKAVVTKEMHLQFDASELEIIHHGRVLEDADTLNR-TLQPNAVIHCFQKIKRYSPY 84
            :|....|..||..:.....::.:...|  |:.||||:|.::|.. .:|....||..:.:.:    
pombe    20 VDSESSVLALKEAIAPVADIEKERQRL--IYAGRVLKDEESLKTYKIQDGHSIHLVKTLGQ---- 78

  Fly    85 VPPAAAEINTK--------HIQ-------ELFSLTSHLQISVTSRFNILQKILA------EYP-- 126
             .||||..|..        :||       .|.:|||    :..:.|||.....:      |.|  
pombe    79 -NPAAAATNVSDRTQQVPTNIQAGQGANNPLANLTS----ARYAGFNIPMPSASMFGPNPENPVP 138

  Fly   127 ---EFRRNLGAQALIRDSVLFNMLHEPEVVQNLVKDYPLICEAAPFI---------------VDT 173
               |...|:.:..:::.|: ..|...|:::..::...|.:..|.|::               .||
pombe   139 PSTEELANMLSNPMVQSSI-NEMFSNPQMLDMIINSSPHLRNAPPYVRQMMQSPEFRRAMTDPDT 202

  Fly   174 IRKELARNSSATQLQEQAASESTTSSEEENSL---GAGSSSSGGSSSTAVAAAAAANRRDE-MAN 234
            :|:       ..||.:|..:    :..:..||   |.|.:..||.....:.....||.... :|.
pombe   203 MRQ-------MAQLHQQMGA----AGIDPMSLMGGGLGGAGLGGLGGAGLGGFGGANNATAGIAG 256

  Fly   235 IRQISRQQLANALANVTPFNSLSNIAQRNADEAVQGDERPRTTSAPLAGVGGAAGTGAGSSSGAI 299
            ...:.:...||.:.|:     |:|:                          |.||.|||.....:
pombe   257 AAPVDQTAAANTIQNL-----LNNL--------------------------GGAGFGAGLGDAGL 290

  Fly   300 SSGSISSELLRNELARAFQSLSQDQPAPVENMEVESGEGPVPEQAATAPADDVDDEDDGGDDSDV 364
            .:|          |..|     ...|||.::               |.|.::             
pombe   291 GAG----------LGGA-----ASPPAPAQD---------------TRPPEE------------- 312

  Fly   365 LPRRYRRHRFTEQLRTMAAMGFINHTQNVSYLELSDGNVEHAINLLM 411
                    |:.|||..:..|||::..:||..|..|.|||:.||..|:
pombe   313 --------RYAEQLSQLNEMGFVDFERNVQALRRSGGNVQGAIESLL 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3223NP_649758.1 Ubl_ubiquitin_like 9..75 CDD:340559 15/54 (28%)
UBA_like_SF 373..410 CDD:473871 16/36 (44%)
dsk2NP_594159.1 rad23 4..>169 CDD:273167 36/160 (23%)
Ubl_Dsk2p_like 4..74 CDD:340523 15/55 (27%)
UBA_Dsk2p_like 310..351 CDD:270509 16/61 (26%)

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