DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3223 and Ubb

DIOPT Version :10

Sequence 1:NP_649758.1 Gene:CG3223 / 40947 FlyBaseID:FBgn0037538 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_035794.1 Gene:Ubb / 22187 MGIID:98888 Length:305 Species:Mus musculus


Alignment Length:71 Identity:13/71 - (18%)
Similarity:29/71 - (40%) Gaps:20/71 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 YLKAVVTKEMHLQFDASEL-------------------EIIHHGRVLEDADTL-NRTLQPNAVIH 73
            ::|.:..|.:.|:.:.|:.                   .:|..|:.|||..|| :..:|..:.:|
Mouse     4 FVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 68

  Fly    74 CFQKIK 79
            ...:::
Mouse    69 LVLRLR 74

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3223NP_649758.1 Ubl_ubiquitin_like 9..75 CDD:340559 13/65 (20%)
UBA_like_SF 373..410 CDD:473871
UbbNP_035794.1 Ubl_ubiquitin 1..76 CDD:340501 13/71 (18%)
Ubl_ubiquitin 77..152 CDD:340501
Ubl_ubiquitin 153..228 CDD:340501
Ubl_ubiquitin 229..304 CDD:340501
Blue background indicates that the domain is not in the aligned region.

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