Protein Alignment CG3223 and rad-23

DIOPT Version :10

• Sequence 1: NP_649758.1
• Gene: CG3223 / 40947
• FlyBaseID: FBgn0037538
• Length: 415
• Species: Drosophila melanogaster
• Sequence 2: NP_496488.2
• Gene: rad-23 / 174785
• WormBaseID: WBGene00013924
• Length: 323
• Species: Caenorhabditis elegans
• Alignment Length: 367
• Identity: 68/367 - (18%)
• Similarity: 121/367 - (32%)
• Gaps: 126/367 - (34%)

  Fly    20 NIDLTRD--VAYLKAVVTKEMHLQFDASELE-IIHHGRVLEDADTLNRTLQPNAVIHCFQKIKRY 81
            |::|..|  :|.:||:|..|....: |.||: :|::|::|:|:                  :|
 Worm    16 NLELNEDQTIAEVKALVASEKGDDY-APELQKLIYNGKILDDS------------------VK-- 59

  Fly    82 SPYVPPAAAEINTKHIQELFSLTSHLQISVTSRFNILQKILAEYPEFRRNLGAQALIRDSVLFNM 146
                   ..|:.       |..:..:.:.::.|     |:....|.......|:
 Worm    60 -------VGEVG-------FDSSKFVVVMLSKR-----KVTEVAPSSTVATAAE----------- 94

  Fly   147 LHEPEVVQNLVKDYPLICEAAPFIVDTIRKELARNSSATQLQEQAASESTTSSEEENSLGAGSSS 211
                          |:...|||........::|..::|     .|.:|:.|..:|||.|......
 Worm    95 --------------PVPVAAAPASNPAPAADVAPEAAA-----PAEAEALTDEQEENVLAITGMG 140

  Fly   212 SGGSSSTAVAAAA------------------AANRRDEMA------NIRQISRQQLANALANVTP 252
            .....:.|...||                  ||::..::.      |:.:.....| |.|||:..
 Worm   141 YDREQTIAALRAAFWNPDRAVEFLLNGLPDDAADQEPDLGPEQNIDNVDEDGNDDL-NMLANMPQ 204

  Fly   253 FNSLSNIAQRNAD--------------EAVQGDERPRTTSAPLAGVGGAAGTGAGSSSGAISSGS 303
            ...:..:.|:|.:              ..||..:..:.....|.. |||.|.||.:.:..
 Worm   205 LAEIRALIQQNPEMLAAVLQQLAAVNPRLVQTIQNNQQAFMDLLN-GGAQGAGAAAGNAP----- 263

  Fly   304 ISSELLRNELARAFQSLSQDQPAPVENME---VESGEGPVPE 342
                 .||...|....||.::.|.:|.::   |.:.|..|.|
 Worm   264 -----ERNTPRRHVIHLSPEEAAAIERIKAIVVNAPEAVVVE 300

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG3223	NP_649758.1	Ubl_ubiquitin_like	9..75	CDD:340559	15/57 (26%)
		UBA_like_SF	373..410	CDD:473871
rad-23	NP_496488.2	rad23	3..319	CDD:273167	68/367 (19%)