DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3223 and ubql-1

DIOPT Version :10

Sequence 1:NP_649758.1 Gene:CG3223 / 40947 FlyBaseID:FBgn0037538 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_740883.1 Gene:ubql-1 / 172434 WormBaseID:WBGene00008852 Length:502 Species:Caenorhabditis elegans


Alignment Length:546 Identity:111/546 - (20%)
Similarity:191/546 - (34%) Gaps:178/546 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MHTVYALLKNKLSDVHPLHNIDLTRDVAYLKAVVTKEMHLQF----DASELEIIHHGRVLEDADT 61
            |.|..||:|..:......:::::..|.:..:   .|:..|.|    :..::.||:.|::|:|.:|
 Worm     1 MATESALIKVHVKSPSNKYDVEIAADASVSE---LKDKVLVFVPTANKEQVCIIYTGKILKDEET 62

  Fly    62 LNR-TLQPNAVIHCFQKIKRYSPYVPPAAAEINTKHIQELFSLTSHLQISVTSR----------- 114
            |.: .:.....:|..  |:..:...|..||...|.......:.|...|.:.|:.           
 Worm    63 LTQHKIADGHTVHLV--IRNQARPTPAPAAATPTASSAPSSNPTPSSQPNPTNNPFAAMGGMGSP 125

  Fly   115 ---FN------------ILQKILAEYPEFRR-----NLGAQALI-RDSVLFNMLHEPEVV----- 153
               .|            |.|::|.. |||.|     |...|||| |:..:.::|::|.|:     
 Worm   126 ADILNNPDAMRSVMDNPITQQLLGN-PEFMRTIIQSNPQFQALIERNPEVGHILNDPNVMRQTME 189

  Fly   154 --------QNLVKDY--------------------------PLICEAA------PFI-------- 170
                    |.:::::                          ||:..|.      ||.        
 Worm   190 MIRNPNMFQEMMRNHDQAIRNLQGIPGGEAALERLYNDVQEPLLNSATNSLSGNPFASLRGDQSS 254

  Fly   171 ---VDTIRKE-------------------LARNSSA-----------TQLQEQAASE-----STT 197
               ||...:|                   .:.|.||           :.|.||..|.     |..
 Worm   255 EPRVDRAGQENNEALPNPWASNANQATNNQSNNRSADFNSLLDSPGISSLMEQMMSNPSMQASMF 319

  Fly   198 SSEEENSLGAGSSSSGGSSSTAVAAAAAANRRDEMANIRQISRQQLANALANVTPFNSLSNIAQR 262
            |.|..||:....|::.|...:.|....:|....:::...:.|..|:.|.:::.:...::.|....
 Worm   320 SPEVINSIRQNMSNNPGLIDSIVGQIPSARDNPQISEGIRRSFPQMLNMMSDPSVMEAMRNPRVS 384

  Fly   263 NADEAVQ-GDERPRTTSAPLAGV--GGAAGTGA-GSSSGAISSGSISSELLRNELARAFQSLSQD 323
            .|...:| |....|..:..|..:  .||.|.|| ||.:.|.|:|:.|:    |.||..|.|::..
 Worm   385 EAFRQIQEGFSTLRREAPQLLNLFQAGAMGGGAFGSDANASSAGANSA----NGLADLFNSMNMG 445

  Fly   324 QPAPVENMEVESGEGPV-PEQAATAPADDVDDEDDGGDDSDVLPRRYRRHRFTEQLRTMAAMGFI 387
            ...|      .|...|| |||.                             :..||..:.:|||.
 Worm   446 GGRP------SSTAAPVNPEQT-----------------------------YASQLEQLQSMGFS 475

  Fly   388 NHTQNVSYLELSDGNVEHAINLLMLS 413
            :..:||:.|..:.|::..|:..|:.|
 Worm   476 DRARNVAALTATFGDLNAAVERLLNS 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3223NP_649758.1 Ubl_ubiquitin_like 9..75 CDD:340559 13/70 (19%)
UBA_like_SF 373..410 CDD:473871 10/36 (28%)
ubql-1NP_740883.1 Ubl_Dsk2p_like 8..80 CDD:340523 14/76 (18%)
rad23 18..>372 CDD:273167 65/359 (18%)
UBA_PLICs 461..500 CDD:270582 11/67 (16%)

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