DRSC/TRiP Functional Genomics Resources

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Protein Alignment CD98hc and IMA3

DIOPT Version :9

Sequence 1:NP_001262354.2 Gene:CD98hc / 40941 FlyBaseID:FBgn0037533 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_012096.1 Gene:IMA3 / 854635 SGDID:S000001434 Length:589 Species:Saccharomyces cerevisiae


Alignment Length:439 Identity:88/439 - (20%)
Similarity:150/439 - (34%) Gaps:119/439 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 AAPQPLP-WYKRGPHAKFASVETCRPEDVQ------------VAKKL-----VSAGAI-----YE 215
            |.|:..| |:|.      |::....|...:            :|.||     :...||     |:
Yeast     6 AHPETEPKWWKE------ATIYQIYPASFKDSNNDGWGDMKGIASKLEYIKELGTDAIWISPFYD 64

  Fly   216 LPA-ALTYDVKKPE-------VEEKIKHLVALYQGSDTRVILDLTPNYAAKNSQLVQDAIA---N 269
            .|. .:.||:...|       ..|....|:........:.|.||..|:.:...:..:::.:   |
Yeast    65 SPQDDMGYDIANYEKVWPTYGTNEDCFALIEKTHKLGMKFITDLVINHCSSEHEWFKESRSSKTN 129

  Fly   270 PEKRSAFVW-------VSGGKALPNNWLKVGGNRSAW---EKVGDNYVLSQFEDGYYDLKMNS-- 322
            | ||..|.|       ..|....||||....|. |||   ||..:.| |..|.....||...:  
Yeast   130 P-KRDWFFWRPPKGYDAEGKPIPPNNWRSYFGG-SAWTFDEKTQEFY-LRLFCSTQPDLNWENED 191

  Fly   323 ---TIIRNEFGAVLKHLVALGVRGFRLKNTKFFALFDSLEDEQISSSPKDFSL-------GPNEY 377
               .|..:..|..|.|    ||.|||:.....::....|.|..:......:.|       ||..:
Yeast   192 CRKAIYESAVGYWLDH----GVDGFRIDVGSLYSKVAGLPDAPVIDENSKWQLSDPFTMNGPRIH 252

  Fly   378 GFYSHRQTTFLSGLGDVLYDYLSI--VKNASDEA--FFSVAEDVMEPQVYQLS----GDSGAYGI 434
            .|:........:.:.|. .:.:::  :::|:||.  .::.|......:::..|    |.|..:..
Yeast   253 EFHQEMNKFIRNRVKDG-REIMTVGEMRHATDETKRLYTSASRHELSELFNFSHTDVGTSPKFRQ 316

  Fly   435 DLPMYGNFVKVLSKSKPDTSLQKELDNTLAQ-----SGTDSWLQWNLADVYVDTPQDPSALAMFL 494
            :|..|.               .|:....||:     :|||.|     :.:|::....|.::..|.
Yeast   317 NLIPYE---------------LKDWKVALAELFRYVNGTDCW-----STIYLENHDQPRSITRFG 361

  Fly   495 SLLPGVPVVAVDAVAYQNVTEETYRQITSLRKTASYMHGNLNLYQADPL 543
            ...|...|::...::...|:                :.|.|.:||...|
Yeast   362 DDSPKNRVISGKLLSVLLVS----------------LSGTLYVYQGQEL 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CD98hcNP_001262354.2 AmyAc_maltase-like 117..593 CDD:200468 88/439 (20%)
IMA3NP_012096.1 AmyAc_SI_OligoGlu_DGase 16..503 CDD:200472 84/429 (20%)
Malt_amylase_C 514..585 CDD:406946
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0366
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
32.770

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