DRSC/TRiP Functional Genomics Resources

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Protein Alignment CD98hc and IMA1

DIOPT Version :9

Sequence 1:NP_001262354.2 Gene:CD98hc / 40941 FlyBaseID:FBgn0037533 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_011803.3 Gene:IMA1 / 853204 SGDID:S000003519 Length:589 Species:Saccharomyces cerevisiae


Alignment Length:437 Identity:92/437 - (21%)
Similarity:151/437 - (34%) Gaps:121/437 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 AAPQPLP-WYKRGPHAKFASVETCRPEDVQ---------VAKKL-----VSAGAI-----YELPA 218
            |.|:..| |:|   .|.|..:.....:|..         :|.||     :.|.||     |:.|.
Yeast     6 AHPETEPKWWK---EATFYQIYPASFKDSNDDGWGDMKGIASKLEYIKELGADAIWISPFYDSPQ 67

  Fly   219 -ALTYDVKKPE-------VEEKIKHLVALYQGSDTRVILDLTPNYAAKNSQLVQDAIA---NPEK 272
             .:.||:...|       ..|....|:........:.|.||..|:.:...:..:::.:   || |
Yeast    68 DDMGYDIANYEKVWPTYGTNEDCFALIEKTHKLGMKFITDLVINHCSSEHEWFKESRSSKTNP-K 131

  Fly   273 RSAFVW-------VSGGKALPNNWLKVGGNRSAW---EKVGDNYVLSQFEDGYYDLKMNS----- 322
            |..|.|       ..|....||||....|. |||   ||..:.| |..|.....||...:     
Yeast   132 RDWFFWRPPKGYDAEGKPIPPNNWKSYFGG-SAWTFDEKTQEFY-LRLFCSTQPDLNWENEDCRK 194

  Fly   323 TIIRNEFGAVLKHLVALGVRGFRLKNTKFFALFDSLEDEQI--------SSSPKDFSLGPNEYGF 379
            .|..:..|..|.|    ||.|||:.....::....|.|..:        ||.|...: ||..:.|
Yeast   195 AIYESAVGYWLDH----GVDGFRIDVGSLYSKVVGLPDAPVVDKNSTWQSSDPYTLN-GPRIHEF 254

  Fly   380 YSHRQTTFLSGLGDVLYDYLSI--VKNASDEA--FFSVAEDVMEPQVYQLS----GDSGAYGIDL 436
            :........:.:.|. .:.:::  :::||||.  .::.|......:::..|    |.|..:..:|
Yeast   255 HQEMNQFIRNRVKDG-REIMTVGEMQHASDETKRLYTSASRHELSELFNFSHTDVGTSPLFRYNL 318

  Fly   437 PMYGNFVKVLSKSKPDTSLQKELDNTLAQ-----SGTDSWLQWNLADVYVDTPQDPSALAMF--- 493
            ..:.               .|:....||:     :|||.|     :.:|::....|.::..|   
Yeast   319 VPFE---------------LKDWKIALAELFRYINGTDCW-----STIYLENHDQPRSITRFGDD 363

  Fly   494 ---------------LSLLPGVPVV----AVDAVAYQNVTEETYRQI 521
                           ||.|.|...|    .:..:.::|...|.|..:
Yeast   364 SPKNRVISGKLLSVLLSALTGTLYVYQGQELGQINFKNWPVEKYEDV 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CD98hcNP_001262354.2 AmyAc_maltase-like 117..593 CDD:200468 92/437 (21%)
IMA1NP_011803.3 AmyAc_SI_OligoGlu_DGase 16..503 CDD:200472 88/427 (21%)
Malt_amylase_C 514..585 CDD:413446
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0366
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
32.770

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