DRSC/TRiP Functional Genomics Resources

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Protein Alignment CD98hc and AMY1

DIOPT Version :9

Sequence 1:NP_001262354.2 Gene:CD98hc / 40941 FlyBaseID:FBgn0037533 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_567714.1 Gene:AMY1 / 828603 AraportID:AT4G25000 Length:423 Species:Arabidopsis thaliana


Alignment Length:363 Identity:64/363 - (17%)
Similarity:126/363 - (34%) Gaps:102/363 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   198 PEDVQVAKKLVSAGAIYELPAALTYDVKKPEVEEKIKHLVALYQGSDTRVILDLTPNYAAKNSQL 262
            |....||.:....|.:|:|.::      |...|.::|.|:........:.:.|:..|:.....: 
plant    66 PPSQSVAPEGYLPGKLYDLNSS------KYGSEAELKSLIKALNQKGIKALADIVINHRTAERK- 123

  Fly   263 VQDAIANPEKRSAFVWVSGGKALPNNWLKVGGNRSAWE-----------------KVGDNYVLSQ 310
                    :.:..:.:..||         ...:|..|:                 ..|.::    
plant   124 --------DDKCGYCYFEGG---------TSDDRLDWDPSFVCRNDPKFPGTGNLDTGGDF---- 167

  Fly   311 FEDGYYDLKMNSTIIRNEFGAVLKHL-VALGVRGFRLKNTKFFALFDSLEDEQISSSPKDFSLGP 374
              ||..|:...:..::.|....:..| ..:|..|:|....:.:|  .|:....:.::..||::|.
plant   168 --DGAPDIDHLNPRVQKELSEWMNWLKTEIGFHGWRFDYVRGYA--SSITKLYVQNTSPDFAVGE 228

  Fly   375 N----EY---GFYSHRQTTFLSGLGDVLYDYLSIVKNASDEAFFSVAEDVMEPQVYQLSGDS--- 429
            .    :|   |...:.|....|||...:.:....|..|.|.....:.:..::.::::|. ||   
plant   229 KWDDMKYGGDGKLDYDQNEHRSGLKQWIEEAGGGVLTAFDFTTKGILQSAVKGELWRLK-DSQGK 292

  Fly   430 --GAYGIDLPMYGNFVKVLSKSKPDTSLQKELDNTLAQSGTDSWLQWNLADVYVDTPQDPSALA- 491
              |..||   |.||.|..             :||      .|::..|    |:   |.|...|. 
plant   293 PPGMIGI---MPGNAVTF-------------IDN------HDTFRTW----VF---PSDKVLLGY 328

  Fly   492 MFLSLLPGVPVVAVDAVAYQNVTE----ETYRQITSLR 525
            :::...||.|     .:.|.:..|    |:..::.::|
plant   329 VYILTHPGTP-----CIFYNHYIEWGLKESISKLVAIR 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CD98hcNP_001262354.2 AmyAc_maltase-like 117..593 CDD:200468 64/363 (18%)
AMY1NP_567714.1 PLN00196 5..422 CDD:165762 64/363 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0366
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR43447
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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