DRSC/TRiP Functional Genomics Resources

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Protein Alignment CD98hc and slc3a1

DIOPT Version :9

Sequence 1:NP_001262354.2 Gene:CD98hc / 40941 FlyBaseID:FBgn0037533 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001072903.1 Gene:slc3a1 / 780365 XenbaseID:XB-GENE-999160 Length:693 Species:Xenopus tropicalis


Alignment Length:741 Identity:157/741 - (21%)
Similarity:248/741 - (33%) Gaps:262/741 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 NPEKVDMVQDEKAAHA--------DGADEQMLGSNGVEDKLAERRDEVKFIKGDHQNGDAKIDIG 115
            :|..|::.|  ||.|.        ||.:|      |..:|:..||:..   :.|......:||..
 Frog     4 DPNSVELKQ--KAGHENNGFISDHDGKEE------GKPEKVEIRRNSK---EEDTHIYSVRIDEI 57

  Fly   116 TVNGG--KPAFTGMSKEELMKYANDPFWVRLRWIFFVCFWAIWV---GMLVGAILIIIGAPKCAA 175
            ..|..  || :.||.|:.|::::|.|.:...|.|.   ||.|.|   .::...|.||..:|||  
 Frog    58 PENAPPLKP-YAGMPKDVLLQFSNQPCYRIAREII---FWLIIVATLAIIAATIAIIAISPKC-- 116

  Fly   176 PQPLPWYKRGPHAKFASVETCRPEDVQVAKKLVSAGAIYEL-PAAL-------TYDVKKPEVEEK 232
               |.|::|.|                          ||:: |.:.       :.|:|  .|:||
 Frog   117 ---LDWWQRSP--------------------------IYQVYPKSFKDSNNDGSGDLK--GVQEK 150

  Fly   233 IKHLVAL----------YQGS----------------------------------DTRVILDLTP 253
            |.|.:.|          |:.|                                  ..::|:||.|
 Frog   151 IDHFIYLDVKNIWVAPFYKSSLKDFNYAVDDHMEVDPTFGTMADFDSMISAMHDKGLKLIIDLIP 215

  Fly   254 NYAAKNSQLVQDAIANPEK-RSAFVW-----VSGGKALPNNWLKVGGNRSAWE--KVGDNYVLSQ 310
            |:.:...:..|.:....:| ...::|     |.|.:..||||:.|.|: ||||  ...:...|.|
 Frog   216 NHTSNKHKWFQLSRNRTDKYTDYYIWHDCAQVGGVRVPPNNWVSVYGD-SAWEYDVTRNQCYLHQ 279

  Fly   311 FEDGYYDLKMNSTIIRNEFGAVLKHLVALGVRGFRLKNTKFFALFDSLEDE-QIS--SSPKDFSL 372
            |.....||..|:..:..|...::|..:..||.||.:.:.||....:...|| |::  ..|...| 
 Frog   280 FRKEQPDLNFNNPDVHEEILNIIKFWLGKGVDGFTINSAKFILEAEHFRDEPQVNKLQDPATIS- 343

  Fly   373 GPNEYGFYSHRQTTFLSGLGDVLYDYLSIVKNASDEAFFSVAEDVMEPQVYQLSG----DSGAYG 433
               .|....|..||...|:.|::.::...:...|           .||..|:..|    |..|..
 Frog   344 ---NYAELFHDYTTTQVGMHDIIRNFRQTINKYS-----------REPGRYRFMGTESNDQPAID 394

  Fly   434 IDLPMYGN-FVK---------VLSKSKPD---TSLQKELDNTLAQSGTDSWLQWNLADVYVDTP- 484
            ..:..||| |::         :|..|:.:   .|:...:|..:....:..|..|     .|..| 
 Frog   395 KTMLYYGNSFIQEADFPLNSYLLDLSRTNLNGLSIFSNVDLWMKSMPSGKWPSW-----MVGGPS 454

  Fly   485 ----------QDPSALAMFLSLLPGVPVV------------------------------------ 503
                      |..:.:.|.|..|||.|..                                    
 Frog   455 YSRISSRVGRQYINVMNMLLLTLPGTPTTYYGEELGMEDGSPNVDTDKPEEYNPVEYPEKTPMQW 519

  Fly   504 -----------------------AVDAVAYQNVTEET---YRQITSLRKTASYMHGNLNLYQADP 542
                                   ||:..|.:|....|   ||::.:||.....:|.....|....
 Frog   520 DSSENAGFSGANKTWLSINPDYEAVNVEAQKNEQYSTLNLYRELNNLRNNELPLHRGWLCYTWSD 584

  Fly   543 LVAFSRIK--SG-NPGYFVIFNPTELPQASNFTIPDNLPD-----KMTVSYFSEQYNNNMDNS-- 597
            |..|:.::  .| |..:.::.|   ...||...:...:||     |:.:|         .|.|  
 Frog   585 LNVFAYVRELDGLNKVFMMVLN---FGGASTINMRQEVPDLPAEAKIRLS---------TDGSRV 637

  Fly   598 GKVAHAGRVNLKDLKVAPHSSIILTY 623
            ||..:.|.:..|     |...:||.|
 Frog   638 GKAVNTGSIETK-----PGEGLILEY 658

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CD98hcNP_001262354.2 AmyAc_maltase-like 117..593 CDD:200468 131/641 (20%)
slc3a1NP_001072903.1 AmyAc_SLC3A1 118..577 CDD:200494 97/507 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1384693at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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