DRSC/TRiP Functional Genomics Resources

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Protein Alignment CD98hc and Slc3a2

DIOPT Version :9

Sequence 1:NP_001262354.2 Gene:CD98hc / 40941 FlyBaseID:FBgn0037533 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_062156.2 Gene:Slc3a2 / 50567 RGDID:3073 Length:566 Species:Rattus norvegicus


Alignment Length:714 Identity:155/714 - (21%)
Similarity:246/714 - (34%) Gaps:263/714 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GGGASKSSVTLPAPGVCDSTINAAAEYPPDSTEVYKTIAEDTFVAASS------NPEKVDMVQDE 69
            |||:..........|:....::||.    ||    .|:::||.|....      .|||    |..
  Rat    11 GGGSVPRQPPSAQTGLDVQVVSAAG----DS----GTMSQDTEVDMKDVELNELEPEK----QPM 63

  Fly    70 KAAHADGADEQMLGSNG-VEDKLAERRDEVKFIKGDHQNGDAKIDIGTVNGGKPAFTGMSKEELM 133
            .||....|.|:    || |:.|:||...|.                    |.|  |||:|||||:
  Rat    64 NAADGAAAGEK----NGLVKIKVAEDEAEA--------------------GVK--FTGLSKEELL 102

  Fly   134 KYANDPFWVRLRWIFFVCFWAIWVGMLVGAILIIIGAPKCAAPQPLP---WYKRGPHAKFASVET 195
            |.|..|.|||.||...:.||..|:|||.||::||:.||:|   :.||   |:.:|...:...::.
  Rat   103 KVAGSPGWVRTRWALLLLFWLGWLGMLAGAVVIIVRAPRC---RELPVQRWWHKGALYRIGDLQA 164

  Fly   196 -CRPEDVQVAKKLVSAGAIYELPAALTYDVK-----------KPEV--------------EEKIK 234
             ..||    |:.:  ||....|....|..||           |.||              :|..|
  Rat   165 FVGPE----ARGI--AGLKNHLEYLSTLKVKGLVLGPIHKNQKDEVNETDLKQIDPDLGSQEDFK 223

  Fly   235 HLVALYQGSDTRVILDLTPNYAAKNSQLV---QDAIANPEKRSAFVWVSGGKALPNNWLKVGGNR 296
            .|:...:.....:||||||||..:|:..:   .|.:|...|.:...|:..               
  Rat   224 DLLQSAKKKSIHIILDLTPNYKGQNAWFLPPQADIVATKMKEALSSWLQD--------------- 273

  Fly   297 SAWEKVGDNYVLSQFEDGYYDLKMNSTIIRNEFGAVLKHLVALGVRGFRLKNTKFFALFDSLEDE 361
                                                       ||.||::               
  Rat   274 -------------------------------------------GVDGFQV--------------- 280

  Fly   362 QISSSPKDFSLGPNEYGFYSHRQTTFLSGLGDVLYDYLSIVKNASDEAFF--SVAEDVMEPQVYQ 424
                                 |....|:.....|.::.:|.||.|::...  ..|...::..|..
  Rat   281 ---------------------RDVGKLANASLYLAEWQNITKNFSEDRLLIAGTASSDLQQIVNI 324

  Fly   425 LSGDSGAYGIDLPMYGNFVK--VLSKSKPDTSLQKELDNTLAQSGTDSWLQWNLADVYVDTPQDP 487
            |...|     ||.:..:::.  |.:....:..:.|.|:.|.::     |..|:::...:.|...|
  Rat   325 LESTS-----DLLLTSSYLSQPVFTGEHAELLVIKYLNATGSR-----WCSWSVSQAGLLTSFIP 379

  Fly   488 SALAMFLSL-------LPGVPV------VAVDAVAYQ-------------------------NVT 514
               |.||.|       |||.||      :.:.|||..                         |:|
  Rat   380 ---AQFLRLYQLLLFTLPGTPVFSYGDELGLQAVALPGQPMEAPFMLWNESSNSQTSSPVSLNMT 441

  Fly   515 EE-----------TYRQITSLR-KTASYMHGNLN-LYQADPLVAFSRIKSGNPGYFVIFNPTEL- 565
            .:           .:|:::.|| |..|.:||:.: |..:..|.::.|....|..|.|:.|..:: 
  Rat   442 VKGQNEDPGSLLTQFRRLSDLRGKERSLLHGDFDALSSSSGLFSYVRHWDQNERYLVVLNFQDVG 506

  Fly   566 ----PQASNFTIPDNLP--DKMTVSYFSEQYNNNMDNSGKVAHAGRVNLKDLKVAPHSSIILTY 623
                ..|||.....:||  ..:.:|..|.:.:.....|        ::|::|.:.|:..::|.:
  Rat   507 LSARVGASNLPAGISLPASANLLLSTDSTRLSREEGTS--------LSLENLSLNPYEGLLLQF 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CD98hcNP_001262354.2 AmyAc_maltase-like 117..593 CDD:200468 123/569 (22%)
Slc3a2NP_062156.2 SLC3A2_N 85..156 CDD:292647 36/95 (38%)
AmyAc_family 139..469 CDD:298606 78/445 (18%)
AmyA 159..514 CDD:223443 81/467 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 75 1.000 Domainoid score I8856
eggNOG 1 0.900 - - E1_COG0366
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1384693at2759
OrthoFinder 1 1.000 - - FOG0004629
OrthoInspector 1 1.000 - - oto95652
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4341
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
98.780

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