DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CD98hc and Mal-A3

DIOPT Version :9

Sequence 1:NP_001262354.2 Gene:CD98hc / 40941 FlyBaseID:FBgn0037533 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_476628.2 Gene:Mal-A3 / 35826 FlyBaseID:FBgn0002571 Length:574 Species:Drosophila melanogaster


Alignment Length:607 Identity:118/607 - (19%)
Similarity:209/607 - (34%) Gaps:177/607 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 MLVGAILIIIGAPKCAAPQPLPWYKRGPHAKFASV--ETCRPEDVQVAKKLVSAGAIYELP---- 217
            :||.:.|:.:..|..|   .:.|:|.|   :|..:  .:.:..|......|:  |...:||    
  Fly     4 LLVLSCLLALALPSLA---EVGWWKTG---QFYQIYPRSFKDSDGDGVGDLI--GITQQLPYLKE 60

  Fly   218 ----------------AALTYDVKKPE-------VEEKIKHLVALYQGSDTRVILDLTPNYAAKN 259
                            |...|||...:       ..|..:.|:|..:..|.::|||..||:.:..
  Fly    61 IGITATWLSPIFTSPMADFGYDVADLKGIDPIFGTMEDFEALLARAKELDIKIILDFVPNHTSDE 125

  Fly   260 SQ-LVQDAIANPEKRSAFVW-----VSGGKALPNNWLKV-GGNRSAWEKVGDNYVLSQFEDGYYD 317
            .. .::.|....|.:..:||     |:|.:..|.||:.| .|:...|.:....|.|.||.....|
  Fly   126 CDWFIRSAAGEEEYKDFYVWHTGKVVNGIRQPPTNWVSVFRGSMWTWNEQRQAYYLHQFHAKQPD 190

  Fly   318 LKMNSTIIRNEFGAVLKHLVALGVRGFRLKNTKFFALFDSLEDEQISSSPKDFSLG-PNEYGFYS 381
            |...:..:......||:..:..|..|||:..........:..|......|::.::. |.:|.:..
  Fly   191 LNYRNPKVVEAMKDVLRFWLRKGAYGFRIDAVPHVYEIPADADGNWPDEPRNEAVSDPEDYTYLQ 255

  Fly   382 HRQTTFLSGLGDVLYDYLSIVK------NASDEAFFSVAEDVMEPQVYQLSGDSGAYGIDLPMYG 440
            |..||......:::|.:..:::      ...|....:.|...:| .:.|..|:....|..:|.  
  Fly   256 HIYTTDQPETLELVYAFRDVIEEIDAELGGDDRVLLTEAYSPLE-VLMQYYGNGTHLGSQIPF-- 317

  Fly   441 NFVKVLSKSKPDTS-------LQKELDN------------------------------------- 461
            || ::|:|....:.       :...|||                                     
  Fly   318 NF-ELLAKISYSSDAYHYSELIHNWLDNMPEGQVANWVFGNHDQSRIGSRLGADRIDACNMIILG 381

  Fly   462 ----TLAQSG-----TDSWLQWNLADVYVDT--PQ--------------DP-------------- 487
                ::...|     ||.|:.|.      ||  ||              ||              
  Fly   382 LPGVSVTYQGEEMGMTDVWISWE------DTVDPQACQSNEQEFERLTRDPVRTPFQWSDEVNAG 440

  Fly   488 --SALAMFLSLLPGVPVVAVD-----AVAYQNVTEETYRQITSLRKTASYMHGNLNLYQADP-LV 544
              :|...:|.:.....:|.|.     |:::.||    |:|:.:||...:...|::::....| ::
  Fly   441 FSNASVTWLPVASNYKLVNVKKERGIALSHLNV----YKQLRALRDEPTLKQGDVSVTAIGPNVL 501

  Fly   545 AFSRIKSGNPGYFVIFNPTELPQASNFTIPDNLPDKMTVSYFSE-QYNNNMDNSGKVAHAGRVNL 608
            ||.|..:|...|..:.|..:..::.|.       |.:..|..:: ||....|.|.:     |.| 
  Fly   502 AFKRSLAGYKSYITLININDDVESINL-------DSVFTSITTQLQYVVVNDKSVR-----RKN- 553

  Fly   609 KDLKVA------PHSSIILTYV 624
             ||..|      |..:::|:.|
  Fly   554 -DLTFANSVLLLPKEAVVLSTV 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CD98hcNP_001262354.2 AmyAc_maltase-like 117..593 CDD:200468 108/568 (19%)
Mal-A3NP_476628.2 AmyAc_maltase 22..490 CDD:200467 90/486 (19%)
Alpha-amylase 46..400 CDD:278554 66/359 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0366
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1384693at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.