DRSC/TRiP Functional Genomics Resources

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Protein Alignment CD98hc and meu7

DIOPT Version :10

Sequence 1:NP_001262354.2 Gene:CD98hc / 40941 FlyBaseID:FBgn0037533 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_596776.1 Gene:meu7 / 2539749 PomBaseID:SPBC16A3.13 Length:774 Species:Schizosaccharomyces pombe


Alignment Length:187 Identity:42/187 - (22%)
Similarity:62/187 - (33%) Gaps:58/187 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 GASKSSVTLPAPGVCD--STINAAAEYPPDSTEVYKTIAEDTFVAASSNPEKVDMVQDEKAAHAD 75
            |..|||.:|.   |||  :.:...:.:|...:.|...:        .:|||.:..:.|:......
pombe   484 GDLKSSDSLK---VCDWQNDLEGLSNFPVRESAVKAFL--------MNNPEGIVDLADKMTDMRG 537

  Fly    76 GADEQMLGSNGVEDKLAERRDEVKFIKGDHQNGDAKIDIG-----TVNGGKPAFTGMSKEELMKY 135
            .....:|..|.||:|...|...:.......:|..|.:.:|     ..||.:.|..|    |.:.|
pombe   538 LCVNPLLLGNFVENKDLPRMASISSDPATLKNAIAFVLMGDGIPMMYNGQELAMRG----EEVPY 598

  Fly   136 ANDPFWVRLRWIFFVCFWAIWVGMLVGAILIIIGAPKCAAPQPLPWYKRGPHAKFAS 192
             |.|              |||..          |.|           ||.|:.||.|
pombe   599 -NRP--------------AIWEK----------GFP-----------KRNPYYKFTS 619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CD98hcNP_001262354.2 AmyAc_maltase-like 117..593 CDD:200468 19/76 (25%)
meu7NP_596776.1 AmyAc_family 25..>144 CDD:476817
AmyAc_family <434..631 CDD:476817 42/187 (22%)
A_amylase_dom_C 648..724 CDD:370390
Blue background indicates that the domain is not in the aligned region.

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