DRSC/TRiP Functional Genomics Resources

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Protein Alignment CD98hc and atgp-2

DIOPT Version :9

Sequence 1:NP_001262354.2 Gene:CD98hc / 40941 FlyBaseID:FBgn0037533 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001254435.1 Gene:atgp-2 / 175125 WormBaseID:WBGene00000225 Length:647 Species:Caenorhabditis elegans


Alignment Length:641 Identity:124/641 - (19%)
Similarity:212/641 - (33%) Gaps:216/641 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 GMSKEELMKYANDPFWVRLRWIFFVCFWAIWVGMLVGAILIIIGAPKCAAPQPLPWYKRGP--HA 188
            |:|::||.::.|||.|..:|.:.||.||.||:.:...|||::..:|.|.......|::...  |.
 Worm    78 GLSEQELEQFRNDPCWKFIRTVLFVLFWLIWLALFAVAILLVCFSPTCVLRAKPNWWQTAVAYHV 142

  Fly   189 KFASVETCRPEDV-----------QVAKKLVSAGAIYELPAALTYDVK-----------KPEVEE 231
            ...|.:....:.|           |:.|..|.  .::..|..::.|.|           |..|.:
 Worm   143 WVPSFQDSDGDGVGDVDGLINRLDQLRKSGVQ--TVWPSPFLISDDEKTAVRSFSQMDPKIGVNQ 205

  Fly   232 KIKHLVALYQGSDTRVILDL--------------------TPNYAAKNSQLVQDAIANPEKRSAF 276
            |...|:......:..:::..                    |||  |..||.             :
 Worm   206 KADELINKIHEKEMNIVISFPIATTSLEHEWFLNSATASKTPN--ANYSQF-------------Y 255

  Fly   277 VWVSGGKALPNNWL----------KVGGNRSA---WEKVGDNYVLSQFEDGYYDLKMNSTIIRNE 328
            .|||  ||..:|:.          :.|..:||   |:                    ||.:..:.
 Worm   256 TWVS--KAADSNFFTEHKNLFYLHEKGNPKSAVLNWQ--------------------NSNLREHM 298

  Fly   329 FGAVLKHLVALGVRGFRLKNTKFFA------------LFDSLEDEQI---SSSPKDFSLGPNEYG 378
            |.| |.:.:..||.||.|:..::.|            ::|.:.|.:.   |.|.:.......:..
 Worm   299 FNA-LSNWIDRGVDGFELQGIEYLARTPNGTEPDWNSIYDVIRDIRFHVDSYSNESTIADGKKIA 362

  Fly   379 FYSHRQ----------------TTFLSGLGDVLYDYLSIVKNASDEA------------FFSVAE 415
            .:|.|:                |.....||:|..|.....||....|            |.|:.|
 Worm   363 LFSTREEAKEKDKKRMAKSGMDTVINYELGEVEKDTKICHKNEGSVATCVHEILSDVLLFHSLNE 427

  Fly   416 DVM------EPQVYQLSGDSGAYGIDLPMYGNFVKVLSKSKPDTSL--------QKELDNTLAQS 466
            .|.      .|.:.:::...|:     ..:...:.||....|.|:.        .:.|.|.....
 Worm   428 QVWPHWRFGSPDLARIASRVGS-----RPHAQLLMVLQMILPGTNNIYYGEEIGMRNLANDSRVP 487

  Fly   467 GTDSWLQWNLADVYVDTPQDPSALAMFLSLL-PGVP----VVAVD---AVAYQNVTEETYRQITS 523
            .....:||           |.|....|.|.: |.||    |..::   ..|....|.:.:.::..
 Worm   488 PQKGAMQW-----------DDSLNGGFTSAISPPVPSNIDVANINWKRQYAEPQSTLKIFAKLAK 541

  Fly   524 LRK------TASYMHGNLNLYQADPLVAFSRIKSGNPG--YFVIFN----PTELPQASNFTIPDN 576
            ||:      |.:.:.|.| :..|..:..|:..::...|  |....|    |.:||...   :|.|
 Worm   542 LRQREDALMTGTTLIGRL-VDGAFTITRFNNFENRTTGNIYVAALNFAEHPVKLPLTD---LPSN 602

  Fly   577 LP-DKMT--------VSYFSEQYNNNMDNSGKVAHAGRVNLKDLKVAPHSSIILTY 623
            .. .|.|        |:|::.|   .:|          ..||::::.|:..::..|
 Worm   603 SKLHKSTIVTATSNCVAYYARQ---TVD----------FGLKEIELEPNEGVVFRY 645

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CD98hcNP_001262354.2 AmyAc_maltase-like 117..593 CDD:200468 119/609 (20%)
atgp-2NP_001254435.1 SLC3A2_N 78..135 CDD:374310 21/56 (38%)
AmyAc_family 130..553 CDD:393300 82/478 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 71 1.000 Domainoid score I6149
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1384693at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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